Gene : Phvul.003G291600 P. vulgaris v2.1
Defline:  (1 of 1) K01969 - 3-methylcrotonyl-CoA carboxylase beta subunit (E6.4.1.4B) Genomic Order:  2964
Name:  ? Phvul.003G291600 Secondary Identifier:  ? PAC:37146168
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris LEU-DEG2-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G291600 0.5kb upstream 0.5kb upstream 6215 true Chr03: 52909813-52916027 Phaseolus vulgaris
Phvul.003G291600 0.5kb upstream 0.5kb upstream 500 false Chr03: 52915528-52916027 Phaseolus vulgaris
Phvul.003G291600 0.5kb downstream 0.5kb downstream 6215 true Chr03: 52909313-52915527 Phaseolus vulgaris
Phvul.003G291600 0.5kb downstream 0.5kb downstream 500 false Chr03: 52909313-52909812 Phaseolus vulgaris
Phvul.003G291600 1.0kb upstream 1.0kb upstream 6715 true Chr03: 52909813-52916527 Phaseolus vulgaris
Phvul.003G291600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 52915528-52916527 Phaseolus vulgaris
Phvul.003G291600 1.0kb downstream 1.0kb downstream 6715 true Chr03: 52908813-52915527 Phaseolus vulgaris
Phvul.003G291600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 52908813-52909812 Phaseolus vulgaris
Phvul.003G291600 2.0kb upstream 2.0kb upstream 7715 true Chr03: 52909813-52917527 Phaseolus vulgaris
Phvul.003G291600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 52915528-52917527 Phaseolus vulgaris
Phvul.003G291600 2.0kb downstream 2.0kb downstream 7715 true Chr03: 52907813-52915527 Phaseolus vulgaris
Phvul.003G291600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 52907813-52909812 Phaseolus vulgaris
Phvul.003G291600 5.0kb upstream 5.0kb upstream 10715 true Chr03: 52909813-52920527 Phaseolus vulgaris
Phvul.003G291600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 52915528-52920527 Phaseolus vulgaris
Phvul.003G291600 5.0kb downstream 5.0kb downstream 10715 true Chr03: 52904813-52915527 Phaseolus vulgaris
Phvul.003G291600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 52904813-52909812 Phaseolus vulgaris
Phvul.003G291600 10.0kb upstream 10.0kb upstream 15715 true Chr03: 52909813-52925527 Phaseolus vulgaris
Phvul.003G291600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 52915528-52925527 Phaseolus vulgaris
Phvul.003G291600 10.0kb downstream 10.0kb downstream 15715 true Chr03: 52899813-52915527 Phaseolus vulgaris
Phvul.003G291600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 52899813-52909812 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303334 5265 Fabidae View MSA
124061199 5270 Rosid View MSA
123740620 5271 Pentapetalae View MSA
122793626 5272 Eudicot View MSA
122044864 5273 Angiosperm View MSA
121344064 5274 Embryophyte View MSA
123424408 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.6411 0.0 152.547 High High
cufflinks 19.6108 0.0 63.9067    
cufflinks 15.7294 0.0 51.0365    
cufflinks 12.7225 0.0 44.4289    
cufflinks 30.4805 0.0 100.655    
cufflinks 7.49861 0.0 26.8306   Low
cufflinks 18.9143 0.0 61.7779    
cufflinks 14.1323 0.0 45.8575    
cufflinks 40.3685 0.0 139.271 High High
cufflinks 23.9996 0.0 77.7889    
cufflinks 10.7308 0.0 37.3442   Low

0 Strain