Gene : Phvul.003G291700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11019:SF49 - PROTEIN DJ-1 HOMOLOG C Genomic Order:  2965
Name:  ? Phvul.003G291700 Secondary Identifier:  ? PAC:37144714
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G291700 0.5kb upstream 0.5kb upstream 4497 true Chr03: 52916684-52921180 Phaseolus vulgaris
Phvul.003G291700 0.5kb upstream 0.5kb upstream 500 false Chr03: 52916684-52917183 Phaseolus vulgaris
Phvul.003G291700 0.5kb downstream 0.5kb downstream 4497 true Chr03: 52917184-52921680 Phaseolus vulgaris
Phvul.003G291700 0.5kb downstream 0.5kb downstream 500 false Chr03: 52921181-52921680 Phaseolus vulgaris
Phvul.003G291700 1.0kb upstream 1.0kb upstream 4997 true Chr03: 52916184-52921180 Phaseolus vulgaris
Phvul.003G291700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 52916184-52917183 Phaseolus vulgaris
Phvul.003G291700 1.0kb downstream 1.0kb downstream 4997 true Chr03: 52917184-52922180 Phaseolus vulgaris
Phvul.003G291700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 52921181-52922180 Phaseolus vulgaris
Phvul.003G291700 2.0kb upstream 2.0kb upstream 5997 true Chr03: 52915184-52921180 Phaseolus vulgaris
Phvul.003G291700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 52915184-52917183 Phaseolus vulgaris
Phvul.003G291700 2.0kb downstream 2.0kb downstream 5997 true Chr03: 52917184-52923180 Phaseolus vulgaris
Phvul.003G291700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 52921181-52923180 Phaseolus vulgaris
Phvul.003G291700 5.0kb upstream 5.0kb upstream 8997 true Chr03: 52912184-52921180 Phaseolus vulgaris
Phvul.003G291700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 52912184-52917183 Phaseolus vulgaris
Phvul.003G291700 5.0kb downstream 5.0kb downstream 8997 true Chr03: 52917184-52926180 Phaseolus vulgaris
Phvul.003G291700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 52921181-52926180 Phaseolus vulgaris
Phvul.003G291700 10.0kb upstream 10.0kb upstream 13997 true Chr03: 52907184-52921180 Phaseolus vulgaris
Phvul.003G291700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 52907184-52917183 Phaseolus vulgaris
Phvul.003G291700 10.0kb downstream 10.0kb downstream 13997 true Chr03: 52917184-52931180 Phaseolus vulgaris
Phvul.003G291700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 52921181-52931180 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299856 5265 Fabidae View MSA
124061338 5270 Rosid View MSA
123738913 5271 Pentapetalae View MSA
122790857 5272 Eudicot View MSA
122044184 5273 Angiosperm View MSA
121350648 5274 Embryophyte View MSA
123428584 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.21739 0.0 17.2347    
cufflinks 7.41854 0.0 20.3486    
cufflinks 9.87136 0.0 26.394   High
cufflinks 7.43674 0.0 20.3874    
cufflinks 4.46533 0.0 12.8474    
cufflinks 10.4526 0.0 27.8718   High
cufflinks 1.55951 0.0 5.03149   Low
cufflinks 1.90543 0.0 6.00802   Low
cufflinks 2.46418 0.0 7.57175    
cufflinks 5.86794 0.0 16.4385    
cufflinks 3.39803 0.0 10.0734    

0 Strain