Gene : Phvul.003G290400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10168:SF69 - GLUTAREDOXIN-C9 Genomic Order:  2951
Name:  ? Phvul.003G290400 Secondary Identifier:  ? PAC:37148231
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris THIOREDOX-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G290400 0.5kb upstream 0.5kb upstream 1113 true Chr03: 52790848-52791960 Phaseolus vulgaris
Phvul.003G290400 0.5kb upstream 0.5kb upstream 500 false Chr03: 52790848-52791347 Phaseolus vulgaris
Phvul.003G290400 0.5kb downstream 0.5kb downstream 1113 true Chr03: 52791348-52792460 Phaseolus vulgaris
Phvul.003G290400 0.5kb downstream 0.5kb downstream 500 false Chr03: 52791961-52792460 Phaseolus vulgaris
Phvul.003G290400 1.0kb upstream 1.0kb upstream 1613 true Chr03: 52790348-52791960 Phaseolus vulgaris
Phvul.003G290400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 52790348-52791347 Phaseolus vulgaris
Phvul.003G290400 1.0kb downstream 1.0kb downstream 1613 true Chr03: 52791348-52792960 Phaseolus vulgaris
Phvul.003G290400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 52791961-52792960 Phaseolus vulgaris
Phvul.003G290400 2.0kb upstream 2.0kb upstream 2613 true Chr03: 52789348-52791960 Phaseolus vulgaris
Phvul.003G290400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 52789348-52791347 Phaseolus vulgaris
Phvul.003G290400 2.0kb downstream 2.0kb downstream 2613 true Chr03: 52791348-52793960 Phaseolus vulgaris
Phvul.003G290400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 52791961-52793960 Phaseolus vulgaris
Phvul.003G290400 5.0kb upstream 5.0kb upstream 5613 true Chr03: 52786348-52791960 Phaseolus vulgaris
Phvul.003G290400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 52786348-52791347 Phaseolus vulgaris
Phvul.003G290400 5.0kb downstream 5.0kb downstream 5613 true Chr03: 52791348-52796960 Phaseolus vulgaris
Phvul.003G290400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 52791961-52796960 Phaseolus vulgaris
Phvul.003G290400 10.0kb upstream 10.0kb upstream 10613 true Chr03: 52781348-52791960 Phaseolus vulgaris
Phvul.003G290400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 52781348-52791347 Phaseolus vulgaris
Phvul.003G290400 10.0kb downstream 10.0kb downstream 10613 true Chr03: 52791348-52801960 Phaseolus vulgaris
Phvul.003G290400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 52791961-52801960 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312672 5265 Fabidae View MSA
124069898 5270 Rosid View MSA
123744216 5271 Pentapetalae View MSA
122796120 5272 Eudicot View MSA
122048311 5273 Angiosperm View MSA
121310926 5274 Embryophyte View MSA
123348298 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.319042 0.0 1.3443 Low  
cufflinks 2.36201 0.0 8.45176   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.225316 0.0 0.977071 Low  
cufflinks 0.2101 0.0 0.92021 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.33646 0.0 1.40456 Low  
cufflinks 0.108246 0.0 0.508126 Low  
cufflinks 0.733458 0.0 2.87898    
cufflinks 10.8313 0.0 32.7626   High
cufflinks 0.122818 0.0 0.565843 Low  

0 Strain