Gene : Phvul.003G290700 P. vulgaris v2.1
Defline:  (1 of 52) PF07983 - X8 domain (X8) Genomic Order:  2954
Name:  ? Phvul.003G290700 Secondary Identifier:  ? PAC:37146476
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G290700 0.5kb upstream 0.5kb upstream 3344 true Chr03: 52812481-52815824 Phaseolus vulgaris
Phvul.003G290700 0.5kb upstream 0.5kb upstream 500 false Chr03: 52812481-52812980 Phaseolus vulgaris
Phvul.003G290700 0.5kb downstream 0.5kb downstream 3344 true Chr03: 52812981-52816324 Phaseolus vulgaris
Phvul.003G290700 0.5kb downstream 0.5kb downstream 500 false Chr03: 52815825-52816324 Phaseolus vulgaris
Phvul.003G290700 1.0kb upstream 1.0kb upstream 3844 true Chr03: 52811981-52815824 Phaseolus vulgaris
Phvul.003G290700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 52811981-52812980 Phaseolus vulgaris
Phvul.003G290700 1.0kb downstream 1.0kb downstream 3844 true Chr03: 52812981-52816824 Phaseolus vulgaris
Phvul.003G290700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 52815825-52816824 Phaseolus vulgaris
Phvul.003G290700 2.0kb upstream 2.0kb upstream 4844 true Chr03: 52810981-52815824 Phaseolus vulgaris
Phvul.003G290700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 52810981-52812980 Phaseolus vulgaris
Phvul.003G290700 2.0kb downstream 2.0kb downstream 4844 true Chr03: 52812981-52817824 Phaseolus vulgaris
Phvul.003G290700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 52815825-52817824 Phaseolus vulgaris
Phvul.003G290700 5.0kb upstream 5.0kb upstream 7844 true Chr03: 52807981-52815824 Phaseolus vulgaris
Phvul.003G290700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 52807981-52812980 Phaseolus vulgaris
Phvul.003G290700 5.0kb downstream 5.0kb downstream 7844 true Chr03: 52812981-52820824 Phaseolus vulgaris
Phvul.003G290700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 52815825-52820824 Phaseolus vulgaris
Phvul.003G290700 10.0kb upstream 10.0kb upstream 12844 true Chr03: 52802981-52815824 Phaseolus vulgaris
Phvul.003G290700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 52802981-52812980 Phaseolus vulgaris
Phvul.003G290700 10.0kb downstream 10.0kb downstream 12844 true Chr03: 52812981-52825824 Phaseolus vulgaris
Phvul.003G290700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 52815825-52825824 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311914 5265 Fabidae View MSA
124074143 5270 Rosid View MSA
123745865 5271 Pentapetalae View MSA
122788495 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.536463 0.0 2.12012    
cufflinks 1.55965 0.0 5.63732    
cufflinks 0.414637 0.0 1.66929 Low Low
cufflinks 0.324922 0.0 1.32597 Low Low
cufflinks 4.05876 0.0 13.3148   High
cufflinks 1.03596 0.0 3.87755    
cufflinks 2.33883 0.0 8.09909    
cufflinks 0.759932 0.0 2.92102    
cufflinks 1.39018 0.0 5.06315    
cufflinks 0.385446 0.0 1.5653   Low
cufflinks 5.48719 0.0 17.3689   High

0 Strain