Gene : Phvul.003G279100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR12497:SF1 - N-ACYLPHOSPHATIDYLETHANOLAMINE SYNTHASE Genomic Order:  2837
Name:  ? Phvul.003G279100 Secondary Identifier:  ? PAC:37147258
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5995 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6433 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6803 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7409 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7416 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G279100 0.5kb upstream 0.5kb upstream 4313 true Chr03: 51624225-51628537 Phaseolus vulgaris
Phvul.003G279100 0.5kb upstream 0.5kb upstream 500 false Chr03: 51624225-51624724 Phaseolus vulgaris
Phvul.003G279100 0.5kb downstream 0.5kb downstream 4313 true Chr03: 51624725-51629037 Phaseolus vulgaris
Phvul.003G279100 0.5kb downstream 0.5kb downstream 500 false Chr03: 51628538-51629037 Phaseolus vulgaris
Phvul.003G279100 1.0kb upstream 1.0kb upstream 4813 true Chr03: 51623725-51628537 Phaseolus vulgaris
Phvul.003G279100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51623725-51624724 Phaseolus vulgaris
Phvul.003G279100 1.0kb downstream 1.0kb downstream 4813 true Chr03: 51624725-51629537 Phaseolus vulgaris
Phvul.003G279100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51628538-51629537 Phaseolus vulgaris
Phvul.003G279100 2.0kb upstream 2.0kb upstream 5813 true Chr03: 51622725-51628537 Phaseolus vulgaris
Phvul.003G279100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51622725-51624724 Phaseolus vulgaris
Phvul.003G279100 2.0kb downstream 2.0kb downstream 5813 true Chr03: 51624725-51630537 Phaseolus vulgaris
Phvul.003G279100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51628538-51630537 Phaseolus vulgaris
Phvul.003G279100 5.0kb upstream 5.0kb upstream 8813 true Chr03: 51619725-51628537 Phaseolus vulgaris
Phvul.003G279100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51619725-51624724 Phaseolus vulgaris
Phvul.003G279100 5.0kb downstream 5.0kb downstream 8813 true Chr03: 51624725-51633537 Phaseolus vulgaris
Phvul.003G279100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51628538-51633537 Phaseolus vulgaris
Phvul.003G279100 10.0kb upstream 10.0kb upstream 13813 true Chr03: 51614725-51628537 Phaseolus vulgaris
Phvul.003G279100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51614725-51624724 Phaseolus vulgaris
Phvul.003G279100 10.0kb downstream 10.0kb downstream 13813 true Chr03: 51624725-51638537 Phaseolus vulgaris
Phvul.003G279100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51628538-51638537 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307884 5265 Fabidae View MSA
124050156 5270 Rosid View MSA
123738586 5271 Pentapetalae View MSA
122788157 5272 Eudicot View MSA
122042520 5273 Angiosperm View MSA
121345475 5274 Embryophyte View MSA
123428376 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.76922 0.0 12.6439   Low
cufflinks 4.70041 0.0 15.0546    
cufflinks 5.56653 0.0 20.4002   High
cufflinks 5.63856 0.0 21.2306   High
cufflinks 3.08648 0.0 13.2579    
cufflinks 3.71812 0.0 15.9564    
cufflinks 3.13706 0.0 10.7288    
cufflinks 2.78051 0.0 12.2929   Low
cufflinks 3.56884 0.0 15.4488    
cufflinks 3.32338 0.0 14.052    
cufflinks 3.36855 0.0 11.5017    

0 Strain