Gene : Phvul.003G280700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10741:SF5 - TRANSLIN-ASSOCIATED PROTEIN X Genomic Order:  2853
Name:  ? Phvul.003G280700 Secondary Identifier:  ? PAC:37147744
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G280700 0.5kb upstream 0.5kb upstream 11066 true Chr03: 51775915-51786980 Phaseolus vulgaris
Phvul.003G280700 0.5kb upstream 0.5kb upstream 500 false Chr03: 51775915-51776414 Phaseolus vulgaris
Phvul.003G280700 0.5kb downstream 0.5kb downstream 11066 true Chr03: 51776415-51787480 Phaseolus vulgaris
Phvul.003G280700 0.5kb downstream 0.5kb downstream 500 false Chr03: 51786981-51787480 Phaseolus vulgaris
Phvul.003G280700 1.0kb upstream 1.0kb upstream 11566 true Chr03: 51775415-51786980 Phaseolus vulgaris
Phvul.003G280700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51775415-51776414 Phaseolus vulgaris
Phvul.003G280700 1.0kb downstream 1.0kb downstream 11566 true Chr03: 51776415-51787980 Phaseolus vulgaris
Phvul.003G280700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51786981-51787980 Phaseolus vulgaris
Phvul.003G280700 2.0kb upstream 2.0kb upstream 12566 true Chr03: 51774415-51786980 Phaseolus vulgaris
Phvul.003G280700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51774415-51776414 Phaseolus vulgaris
Phvul.003G280700 2.0kb downstream 2.0kb downstream 12566 true Chr03: 51776415-51788980 Phaseolus vulgaris
Phvul.003G280700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51786981-51788980 Phaseolus vulgaris
Phvul.003G280700 5.0kb upstream 5.0kb upstream 15566 true Chr03: 51771415-51786980 Phaseolus vulgaris
Phvul.003G280700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51771415-51776414 Phaseolus vulgaris
Phvul.003G280700 5.0kb downstream 5.0kb downstream 15566 true Chr03: 51776415-51791980 Phaseolus vulgaris
Phvul.003G280700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51786981-51791980 Phaseolus vulgaris
Phvul.003G280700 10.0kb upstream 10.0kb upstream 20566 true Chr03: 51766415-51786980 Phaseolus vulgaris
Phvul.003G280700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51766415-51776414 Phaseolus vulgaris
Phvul.003G280700 10.0kb downstream 10.0kb downstream 20566 true Chr03: 51776415-51796980 Phaseolus vulgaris
Phvul.003G280700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51786981-51796980 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303722 5265 Fabidae View MSA
124067948 5270 Rosid View MSA
123752005 5271 Pentapetalae View MSA
122788507 5272 Eudicot View MSA
122041771 5273 Angiosperm View MSA
121345786 5274 Embryophyte View MSA
123426526 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.25073 0.0 34.0229    
cufflinks 11.5904 0.0 46.0583   High
cufflinks 5.90349 0.0 21.5049    
cufflinks 8.2016 0.0 29.7622    
cufflinks 6.94219 0.0 25.0681    
cufflinks 6.65402 0.0 28.2514    
cufflinks 5.03845 0.0 24.0618   Low
cufflinks 7.34795 0.0 35.599    
cufflinks 4.23647 0.0 17.3339   Low
cufflinks 11.3363 0.0 43.534   High
cufflinks 6.98937 0.0 31.4693    

0 Strain