Gene : Phvul.003G279900 P. vulgaris v2.1
Genomic Order:  2845 Name:  ? Phvul.003G279900
Secondary Identifier:  ? PAC:37147637
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G279900 0.5kb upstream 0.5kb upstream 4475 true Chr03: 51712541-51717015 Phaseolus vulgaris
Phvul.003G279900 0.5kb upstream 0.5kb upstream 500 false Chr03: 51716516-51717015 Phaseolus vulgaris
Phvul.003G279900 0.5kb downstream 0.5kb downstream 4475 true Chr03: 51712041-51716515 Phaseolus vulgaris
Phvul.003G279900 0.5kb downstream 0.5kb downstream 500 false Chr03: 51712041-51712540 Phaseolus vulgaris
Phvul.003G279900 1.0kb upstream 1.0kb upstream 4975 true Chr03: 51712541-51717515 Phaseolus vulgaris
Phvul.003G279900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51716516-51717515 Phaseolus vulgaris
Phvul.003G279900 1.0kb downstream 1.0kb downstream 4975 true Chr03: 51711541-51716515 Phaseolus vulgaris
Phvul.003G279900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51711541-51712540 Phaseolus vulgaris
Phvul.003G279900 2.0kb upstream 2.0kb upstream 5975 true Chr03: 51712541-51718515 Phaseolus vulgaris
Phvul.003G279900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51716516-51718515 Phaseolus vulgaris
Phvul.003G279900 2.0kb downstream 2.0kb downstream 5975 true Chr03: 51710541-51716515 Phaseolus vulgaris
Phvul.003G279900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51710541-51712540 Phaseolus vulgaris
Phvul.003G279900 5.0kb upstream 5.0kb upstream 8975 true Chr03: 51712541-51721515 Phaseolus vulgaris
Phvul.003G279900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51716516-51721515 Phaseolus vulgaris
Phvul.003G279900 5.0kb downstream 5.0kb downstream 8975 true Chr03: 51707541-51716515 Phaseolus vulgaris
Phvul.003G279900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51707541-51712540 Phaseolus vulgaris
Phvul.003G279900 10.0kb upstream 10.0kb upstream 13975 true Chr03: 51712541-51726515 Phaseolus vulgaris
Phvul.003G279900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51716516-51726515 Phaseolus vulgaris
Phvul.003G279900 10.0kb downstream 10.0kb downstream 13975 true Chr03: 51702541-51716515 Phaseolus vulgaris
Phvul.003G279900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51702541-51712540 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304707 5265 Fabidae View MSA
124064413 5270 Rosid View MSA
123743072 5271 Pentapetalae View MSA
122789206 5272 Eudicot View MSA
122045769 5273 Angiosperm View MSA
121344734 5274 Embryophyte View MSA
123380092 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.8615 0.0 16.2412    
cufflinks 4.4229 0.0 15.1699    
cufflinks 6.54343 0.0 23.8208   High
cufflinks 2.86042 0.0 10.8185   Low
cufflinks 3.9566 0.0 14.1017    
cufflinks 4.42622 0.0 15.2036    
cufflinks 4.5239 0.0 15.5044    
cufflinks 4.8733 0.0 16.4379    
cufflinks 3.59874 0.0 13.1698    
cufflinks 6.50835 0.0 20.6866   High
cufflinks 3.6647 0.0 13.3144    

0 Strain