Gene : Phvul.003G282000 P. vulgaris v2.1
Defline:  (1 of 2) K15889 - prenylcysteine alpha-carboxyl methylesterase (PCME) Genomic Order:  2866
Name:  ? Phvul.003G282000 Secondary Identifier:  ? PAC:37148364
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G282000 0.5kb upstream 0.5kb upstream 8932 true Chr03: 51920408-51929339 Phaseolus vulgaris
Phvul.003G282000 0.5kb upstream 0.5kb upstream 500 false Chr03: 51920408-51920907 Phaseolus vulgaris
Phvul.003G282000 0.5kb downstream 0.5kb downstream 8932 true Chr03: 51920908-51929839 Phaseolus vulgaris
Phvul.003G282000 0.5kb downstream 0.5kb downstream 500 false Chr03: 51929340-51929839 Phaseolus vulgaris
Phvul.003G282000 1.0kb upstream 1.0kb upstream 9432 true Chr03: 51919908-51929339 Phaseolus vulgaris
Phvul.003G282000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51919908-51920907 Phaseolus vulgaris
Phvul.003G282000 1.0kb downstream 1.0kb downstream 9432 true Chr03: 51920908-51930339 Phaseolus vulgaris
Phvul.003G282000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51929340-51930339 Phaseolus vulgaris
Phvul.003G282000 2.0kb upstream 2.0kb upstream 10432 true Chr03: 51918908-51929339 Phaseolus vulgaris
Phvul.003G282000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51918908-51920907 Phaseolus vulgaris
Phvul.003G282000 2.0kb downstream 2.0kb downstream 10432 true Chr03: 51920908-51931339 Phaseolus vulgaris
Phvul.003G282000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51929340-51931339 Phaseolus vulgaris
Phvul.003G282000 5.0kb upstream 5.0kb upstream 13432 true Chr03: 51915908-51929339 Phaseolus vulgaris
Phvul.003G282000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51915908-51920907 Phaseolus vulgaris
Phvul.003G282000 5.0kb downstream 5.0kb downstream 13432 true Chr03: 51920908-51934339 Phaseolus vulgaris
Phvul.003G282000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51929340-51934339 Phaseolus vulgaris
Phvul.003G282000 10.0kb upstream 10.0kb upstream 18432 true Chr03: 51910908-51929339 Phaseolus vulgaris
Phvul.003G282000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51910908-51920907 Phaseolus vulgaris
Phvul.003G282000 10.0kb downstream 10.0kb downstream 18432 true Chr03: 51920908-51939339 Phaseolus vulgaris
Phvul.003G282000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51929340-51939339 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299866 5265 Fabidae View MSA
124067469 5270 Rosid View MSA
123753603 5271 Pentapetalae View MSA
122794691 5272 Eudicot View MSA
122045276 5273 Angiosperm View MSA
121347887 5274 Embryophyte View MSA
123423984 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.70509 0.0 18.5227    
cufflinks 6.5137 0.0 18.0775    
cufflinks 7.61033 0.0 20.7977    
cufflinks 5.31703 0.0 15.0192    
cufflinks 5.58728 0.0 15.7475    
cufflinks 6.11111 0.0 17.0484    
cufflinks 5.54419 0.0 15.5883    
cufflinks 5.60921 0.0 15.7324    
cufflinks 5.138 0.0 14.5947    
cufflinks 12.6709 0.0 33.367   High
cufflinks 5.36208 0.0 15.1843    

0 Strain