Gene : Phvul.003G271300 P. vulgaris v2.1
Defline:  (1 of 5) PTHR31942:SF18 - MLO-LIKE PROTEIN 10-RELATED Genomic Order:  2760
Name:  ? Phvul.003G271300 Secondary Identifier:  ? PAC:37145827
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G271300 0.5kb upstream 0.5kb upstream 6545 true Chr03: 50875782-50882326 Phaseolus vulgaris
Phvul.003G271300 0.5kb upstream 0.5kb upstream 500 false Chr03: 50875782-50876281 Phaseolus vulgaris
Phvul.003G271300 0.5kb downstream 0.5kb downstream 6545 true Chr03: 50876282-50882826 Phaseolus vulgaris
Phvul.003G271300 0.5kb downstream 0.5kb downstream 500 false Chr03: 50882327-50882826 Phaseolus vulgaris
Phvul.003G271300 1.0kb upstream 1.0kb upstream 7045 true Chr03: 50875282-50882326 Phaseolus vulgaris
Phvul.003G271300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50875282-50876281 Phaseolus vulgaris
Phvul.003G271300 1.0kb downstream 1.0kb downstream 7045 true Chr03: 50876282-50883326 Phaseolus vulgaris
Phvul.003G271300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50882327-50883326 Phaseolus vulgaris
Phvul.003G271300 2.0kb upstream 2.0kb upstream 8045 true Chr03: 50874282-50882326 Phaseolus vulgaris
Phvul.003G271300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50874282-50876281 Phaseolus vulgaris
Phvul.003G271300 2.0kb downstream 2.0kb downstream 8045 true Chr03: 50876282-50884326 Phaseolus vulgaris
Phvul.003G271300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50882327-50884326 Phaseolus vulgaris
Phvul.003G271300 5.0kb upstream 5.0kb upstream 11045 true Chr03: 50871282-50882326 Phaseolus vulgaris
Phvul.003G271300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50871282-50876281 Phaseolus vulgaris
Phvul.003G271300 5.0kb downstream 5.0kb downstream 11045 true Chr03: 50876282-50887326 Phaseolus vulgaris
Phvul.003G271300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50882327-50887326 Phaseolus vulgaris
Phvul.003G271300 10.0kb upstream 10.0kb upstream 16045 true Chr03: 50866282-50882326 Phaseolus vulgaris
Phvul.003G271300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50866282-50876281 Phaseolus vulgaris
Phvul.003G271300 10.0kb downstream 10.0kb downstream 16045 true Chr03: 50876282-50892326 Phaseolus vulgaris
Phvul.003G271300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50882327-50892326 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304130 5265 Fabidae View MSA
124063446 5270 Rosid View MSA
123751261 5271 Pentapetalae View MSA
122792831 5272 Eudicot View MSA
122047859 5273 Angiosperm View MSA
121350481 5274 Embryophyte View MSA
123428182 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.87943 0.0 16.4431   Low
cufflinks 11.5841 0.0 30.659    
cufflinks 18.6071 0.0 48.1684    
cufflinks 4.90127 0.0 14.0465   Low
cufflinks 19.7523 0.0 51.1703    
cufflinks 12.9862 0.0 34.1131    
cufflinks 17.6712 0.0 45.8554    
cufflinks 23.8808 0.0 61.7311   High
cufflinks 12.2447 0.0 32.3537    
cufflinks 10.0151 0.0 26.7999    
cufflinks 28.3243 0.0 73.267   High

0 Strain