Gene : Phvul.003G271600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR14374 - FOIE GRAS Genomic Order:  2763
Name:  ? Phvul.003G271600 Secondary Identifier:  ? PAC:37145306
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G271600 0.5kb upstream 0.5kb upstream 7736 true Chr03: 50915765-50923500 Phaseolus vulgaris
Phvul.003G271600 0.5kb upstream 0.5kb upstream 500 false Chr03: 50923001-50923500 Phaseolus vulgaris
Phvul.003G271600 0.5kb downstream 0.5kb downstream 7736 true Chr03: 50915265-50923000 Phaseolus vulgaris
Phvul.003G271600 0.5kb downstream 0.5kb downstream 500 false Chr03: 50915265-50915764 Phaseolus vulgaris
Phvul.003G271600 1.0kb upstream 1.0kb upstream 8236 true Chr03: 50915765-50924000 Phaseolus vulgaris
Phvul.003G271600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50923001-50924000 Phaseolus vulgaris
Phvul.003G271600 1.0kb downstream 1.0kb downstream 8236 true Chr03: 50914765-50923000 Phaseolus vulgaris
Phvul.003G271600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50914765-50915764 Phaseolus vulgaris
Phvul.003G271600 2.0kb upstream 2.0kb upstream 9236 true Chr03: 50915765-50925000 Phaseolus vulgaris
Phvul.003G271600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50923001-50925000 Phaseolus vulgaris
Phvul.003G271600 2.0kb downstream 2.0kb downstream 9236 true Chr03: 50913765-50923000 Phaseolus vulgaris
Phvul.003G271600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50913765-50915764 Phaseolus vulgaris
Phvul.003G271600 5.0kb upstream 5.0kb upstream 12236 true Chr03: 50915765-50928000 Phaseolus vulgaris
Phvul.003G271600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50923001-50928000 Phaseolus vulgaris
Phvul.003G271600 5.0kb downstream 5.0kb downstream 12236 true Chr03: 50910765-50923000 Phaseolus vulgaris
Phvul.003G271600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50910765-50915764 Phaseolus vulgaris
Phvul.003G271600 10.0kb upstream 10.0kb upstream 17236 true Chr03: 50915765-50933000 Phaseolus vulgaris
Phvul.003G271600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50923001-50933000 Phaseolus vulgaris
Phvul.003G271600 10.0kb downstream 10.0kb downstream 17236 true Chr03: 50905765-50923000 Phaseolus vulgaris
Phvul.003G271600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50905765-50915764 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305098 5265 Fabidae View MSA
124064805 5270 Rosid View MSA
123736762 5271 Pentapetalae View MSA
122791582 5272 Eudicot View MSA
122043312 5273 Angiosperm View MSA
121344213 5274 Embryophyte View MSA
123424379 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.86644 0.0 8.00837   Low
cufflinks 6.49375 0.0 17.0382    
cufflinks 9.81235 0.0 25.3843    
cufflinks 4.04001 0.0 11.0015   Low
cufflinks 9.41849 0.0 24.4054    
cufflinks 11.219 0.0 28.9998    
cufflinks 10.1245 0.0 26.1858    
cufflinks 9.68623 0.0 25.0594    
cufflinks 11.4229 0.0 29.5264    
cufflinks 10.0643 0.0 26.036    
cufflinks 8.35443 0.0 21.713    

0 Strain