Gene : Phvul.003G272200 P. vulgaris v2.1
Defline:  (1 of 1) PTHR15348:SF0 - PROTEIN DEAD RINGER Genomic Order:  2769
Name:  ? Phvul.003G272200 Secondary Identifier:  ? PAC:37144366
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G272200 0.5kb upstream 0.5kb upstream 8829 true Chr03: 50976750-50985578 Phaseolus vulgaris
Phvul.003G272200 0.5kb upstream 0.5kb upstream 500 false Chr03: 50985079-50985578 Phaseolus vulgaris
Phvul.003G272200 0.5kb downstream 0.5kb downstream 8829 true Chr03: 50976250-50985078 Phaseolus vulgaris
Phvul.003G272200 0.5kb downstream 0.5kb downstream 500 false Chr03: 50976250-50976749 Phaseolus vulgaris
Phvul.003G272200 1.0kb upstream 1.0kb upstream 9329 true Chr03: 50976750-50986078 Phaseolus vulgaris
Phvul.003G272200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50985079-50986078 Phaseolus vulgaris
Phvul.003G272200 1.0kb downstream 1.0kb downstream 9329 true Chr03: 50975750-50985078 Phaseolus vulgaris
Phvul.003G272200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50975750-50976749 Phaseolus vulgaris
Phvul.003G272200 2.0kb upstream 2.0kb upstream 10329 true Chr03: 50976750-50987078 Phaseolus vulgaris
Phvul.003G272200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50985079-50987078 Phaseolus vulgaris
Phvul.003G272200 2.0kb downstream 2.0kb downstream 10329 true Chr03: 50974750-50985078 Phaseolus vulgaris
Phvul.003G272200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50974750-50976749 Phaseolus vulgaris
Phvul.003G272200 5.0kb upstream 5.0kb upstream 13329 true Chr03: 50976750-50990078 Phaseolus vulgaris
Phvul.003G272200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50985079-50990078 Phaseolus vulgaris
Phvul.003G272200 5.0kb downstream 5.0kb downstream 13329 true Chr03: 50971750-50985078 Phaseolus vulgaris
Phvul.003G272200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50971750-50976749 Phaseolus vulgaris
Phvul.003G272200 10.0kb upstream 10.0kb upstream 18329 true Chr03: 50976750-50995078 Phaseolus vulgaris
Phvul.003G272200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50985079-50995078 Phaseolus vulgaris
Phvul.003G272200 10.0kb downstream 10.0kb downstream 18329 true Chr03: 50966750-50985078 Phaseolus vulgaris
Phvul.003G272200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50966750-50976749 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254922 5265 Fabidae View MSA
124071452 5270 Rosid View MSA
123742990 5271 Pentapetalae View MSA
122787773 5272 Eudicot View MSA
122045434 5273 Angiosperm View MSA
121346901 5274 Embryophyte View MSA
123426327 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.59266 0.0 15.6452    
cufflinks 7.41004 0.0 20.2211    
cufflinks 8.39176 0.0 22.6254   High
cufflinks 5.90298 0.0 16.5859    
cufflinks 4.92924 0.0 14.0827   Low
cufflinks 6.96277 0.0 19.0877    
cufflinks 7.30114 0.0 19.9069    
cufflinks 10.0773 0.0 26.6923   High
cufflinks 7.19952 0.0 19.7019    
cufflinks 6.12395 0.0 17.0192    
cufflinks 5.60923 0.0 15.7672    

0 Strain