Gene : Phvul.003G273800 P. vulgaris v2.1
Defline:  (1 of 2) PF07082 - Protein of unknown function (DUF1350) (DUF1350) Genomic Order:  2785
Name:  ? Phvul.003G273800 Secondary Identifier:  ? PAC:37147012
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G273800 0.5kb upstream 0.5kb upstream 5941 true Chr03: 51111395-51117335 Phaseolus vulgaris
Phvul.003G273800 0.5kb upstream 0.5kb upstream 500 false Chr03: 51116836-51117335 Phaseolus vulgaris
Phvul.003G273800 0.5kb downstream 0.5kb downstream 5941 true Chr03: 51110895-51116835 Phaseolus vulgaris
Phvul.003G273800 0.5kb downstream 0.5kb downstream 500 false Chr03: 51110895-51111394 Phaseolus vulgaris
Phvul.003G273800 1.0kb upstream 1.0kb upstream 6441 true Chr03: 51111395-51117835 Phaseolus vulgaris
Phvul.003G273800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51116836-51117835 Phaseolus vulgaris
Phvul.003G273800 1.0kb downstream 1.0kb downstream 6441 true Chr03: 51110395-51116835 Phaseolus vulgaris
Phvul.003G273800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51110395-51111394 Phaseolus vulgaris
Phvul.003G273800 2.0kb upstream 2.0kb upstream 7441 true Chr03: 51111395-51118835 Phaseolus vulgaris
Phvul.003G273800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51116836-51118835 Phaseolus vulgaris
Phvul.003G273800 2.0kb downstream 2.0kb downstream 7441 true Chr03: 51109395-51116835 Phaseolus vulgaris
Phvul.003G273800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51109395-51111394 Phaseolus vulgaris
Phvul.003G273800 5.0kb upstream 5.0kb upstream 10441 true Chr03: 51111395-51121835 Phaseolus vulgaris
Phvul.003G273800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51116836-51121835 Phaseolus vulgaris
Phvul.003G273800 5.0kb downstream 5.0kb downstream 10441 true Chr03: 51106395-51116835 Phaseolus vulgaris
Phvul.003G273800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51106395-51111394 Phaseolus vulgaris
Phvul.003G273800 10.0kb upstream 10.0kb upstream 15441 true Chr03: 51111395-51126835 Phaseolus vulgaris
Phvul.003G273800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51116836-51126835 Phaseolus vulgaris
Phvul.003G273800 10.0kb downstream 10.0kb downstream 15441 true Chr03: 51101395-51116835 Phaseolus vulgaris
Phvul.003G273800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51101395-51111394 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300067 5265 Fabidae View MSA
124063161 5270 Rosid View MSA
123738140 5271 Pentapetalae View MSA
122789213 5272 Eudicot View MSA
122044071 5273 Angiosperm View MSA
121345881 5274 Embryophyte View MSA
123427638 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.9909 0.0 51.9298   High
cufflinks 7.87358 0.0 21.7898    
cufflinks 15.5756 0.0 40.8943   High
cufflinks 12.6469 0.0 33.7273    
cufflinks 9.82071 0.0 26.7832    
cufflinks 7.65474 0.0 21.2409    
cufflinks 6.59461 0.0 18.536    
cufflinks 4.73013 0.0 13.7167   Low
cufflinks 5.632 0.0 16.093   Low
cufflinks 15.1807 0.0 39.9479   High
cufflinks 8.77359 0.0 24.1457    

0 Strain