Gene : Phvul.003G273100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10629:SF34 - DNA (CYTOSINE-5)-METHYLTRANSFERASE CMT2 Genomic Order:  2778
Name:  ? Phvul.003G273100 Secondary Identifier:  ? PAC:37146401
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G273100 0.5kb upstream 0.5kb upstream 10940 true Chr03: 51039325-51050264 Phaseolus vulgaris
Phvul.003G273100 0.5kb upstream 0.5kb upstream 500 false Chr03: 51049765-51050264 Phaseolus vulgaris
Phvul.003G273100 0.5kb downstream 0.5kb downstream 10940 true Chr03: 51038825-51049764 Phaseolus vulgaris
Phvul.003G273100 0.5kb downstream 0.5kb downstream 500 false Chr03: 51038825-51039324 Phaseolus vulgaris
Phvul.003G273100 1.0kb upstream 1.0kb upstream 11440 true Chr03: 51039325-51050764 Phaseolus vulgaris
Phvul.003G273100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51049765-51050764 Phaseolus vulgaris
Phvul.003G273100 1.0kb downstream 1.0kb downstream 11440 true Chr03: 51038325-51049764 Phaseolus vulgaris
Phvul.003G273100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51038325-51039324 Phaseolus vulgaris
Phvul.003G273100 2.0kb upstream 2.0kb upstream 12440 true Chr03: 51039325-51051764 Phaseolus vulgaris
Phvul.003G273100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51049765-51051764 Phaseolus vulgaris
Phvul.003G273100 2.0kb downstream 2.0kb downstream 12440 true Chr03: 51037325-51049764 Phaseolus vulgaris
Phvul.003G273100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51037325-51039324 Phaseolus vulgaris
Phvul.003G273100 5.0kb upstream 5.0kb upstream 15440 true Chr03: 51039325-51054764 Phaseolus vulgaris
Phvul.003G273100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51049765-51054764 Phaseolus vulgaris
Phvul.003G273100 5.0kb downstream 5.0kb downstream 15440 true Chr03: 51034325-51049764 Phaseolus vulgaris
Phvul.003G273100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51034325-51039324 Phaseolus vulgaris
Phvul.003G273100 10.0kb upstream 10.0kb upstream 20440 true Chr03: 51039325-51059764 Phaseolus vulgaris
Phvul.003G273100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51049765-51059764 Phaseolus vulgaris
Phvul.003G273100 10.0kb downstream 10.0kb downstream 20440 true Chr03: 51029325-51049764 Phaseolus vulgaris
Phvul.003G273100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51029325-51039324 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307648 5265 Fabidae View MSA
124071027 5270 Rosid View MSA
123743070 5271 Pentapetalae View MSA
122794759 5272 Eudicot View MSA
122046536 5273 Angiosperm View MSA
121345495 5274 Embryophyte View MSA
123428443 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.81725 0.0 6.73888   Low
cufflinks 9.54749 0.0 30.9267    
cufflinks 11.2452 0.0 36.0563    
cufflinks 3.48157 0.0 13.5085   Low
cufflinks 6.79893 0.0 23.123    
cufflinks 14.8044 0.0 47.2306   High
cufflinks 9.37193 0.0 30.6006    
cufflinks 9.9169 0.0 32.0722    
cufflinks 9.18877 0.0 29.8439    
cufflinks 8.35901 0.0 27.4942    
cufflinks 5.49119 0.0 19.2244    

0 Strain