Gene : Phvul.003G275000 P. vulgaris v2.1
Defline:  (1 of 5) PTHR10891:SF574 - CALCIUM-BINDING PROTEIN CML30-RELATED Genomic Order:  2797
Name:  ? Phvul.003G275000 Secondary Identifier:  ? PAC:37145889
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G275000 0.5kb upstream 0.5kb upstream 3791 true Chr03: 51260993-51264783 Phaseolus vulgaris
Phvul.003G275000 0.5kb upstream 0.5kb upstream 500 false Chr03: 51260993-51261492 Phaseolus vulgaris
Phvul.003G275000 0.5kb downstream 0.5kb downstream 3791 true Chr03: 51261493-51265283 Phaseolus vulgaris
Phvul.003G275000 0.5kb downstream 0.5kb downstream 500 false Chr03: 51264784-51265283 Phaseolus vulgaris
Phvul.003G275000 1.0kb upstream 1.0kb upstream 4291 true Chr03: 51260493-51264783 Phaseolus vulgaris
Phvul.003G275000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51260493-51261492 Phaseolus vulgaris
Phvul.003G275000 1.0kb downstream 1.0kb downstream 4291 true Chr03: 51261493-51265783 Phaseolus vulgaris
Phvul.003G275000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51264784-51265783 Phaseolus vulgaris
Phvul.003G275000 2.0kb upstream 2.0kb upstream 5291 true Chr03: 51259493-51264783 Phaseolus vulgaris
Phvul.003G275000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51259493-51261492 Phaseolus vulgaris
Phvul.003G275000 2.0kb downstream 2.0kb downstream 5291 true Chr03: 51261493-51266783 Phaseolus vulgaris
Phvul.003G275000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51264784-51266783 Phaseolus vulgaris
Phvul.003G275000 5.0kb upstream 5.0kb upstream 8291 true Chr03: 51256493-51264783 Phaseolus vulgaris
Phvul.003G275000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51256493-51261492 Phaseolus vulgaris
Phvul.003G275000 5.0kb downstream 5.0kb downstream 8291 true Chr03: 51261493-51269783 Phaseolus vulgaris
Phvul.003G275000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51264784-51269783 Phaseolus vulgaris
Phvul.003G275000 10.0kb upstream 10.0kb upstream 13291 true Chr03: 51251493-51264783 Phaseolus vulgaris
Phvul.003G275000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51251493-51261492 Phaseolus vulgaris
Phvul.003G275000 10.0kb downstream 10.0kb downstream 13291 true Chr03: 51261493-51274783 Phaseolus vulgaris
Phvul.003G275000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51264784-51274783 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041090 5273 Angiosperm View MSA
122300657 5265 Fabidae View MSA
124060611 5270 Rosid View MSA
123746519 5271 Pentapetalae View MSA
122793448 5272 Eudicot View MSA
121346825 5274 Embryophyte View MSA
123425898 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.1257 0.0 55.0668   High
cufflinks 11.406 0.0 31.0608    
cufflinks 6.14661 0.0 17.6754   Low
cufflinks 15.0614 0.0 40.3255    
cufflinks 6.47536 0.0 18.7486   Low
cufflinks 9.06413 0.0 25.1441    
cufflinks 11.1697 0.0 30.4233    
cufflinks 12.6295 0.0 33.9537    
cufflinks 9.05859 0.0 25.1991    
cufflinks 12.8028 0.0 34.5716    
cufflinks 13.7836 0.0 37.1158    

0 Strain