Gene : Phvul.003G276400 P. vulgaris v2.1
Defline:  (1 of 3) K02873 - large subunit ribosomal protein L13e (RP-L13e, RPL13) Genomic Order:  2812
Name:  ? Phvul.003G276400 Secondary Identifier:  ? PAC:37147561
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G276400 0.5kb upstream 0.5kb upstream 1658 true Chr03: 51385114-51386771 Phaseolus vulgaris
Phvul.003G276400 0.5kb upstream 0.5kb upstream 500 false Chr03: 51385114-51385613 Phaseolus vulgaris
Phvul.003G276400 0.5kb downstream 0.5kb downstream 1658 true Chr03: 51385614-51387271 Phaseolus vulgaris
Phvul.003G276400 0.5kb downstream 0.5kb downstream 500 false Chr03: 51386772-51387271 Phaseolus vulgaris
Phvul.003G276400 1.0kb upstream 1.0kb upstream 2158 true Chr03: 51384614-51386771 Phaseolus vulgaris
Phvul.003G276400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51384614-51385613 Phaseolus vulgaris
Phvul.003G276400 1.0kb downstream 1.0kb downstream 2158 true Chr03: 51385614-51387771 Phaseolus vulgaris
Phvul.003G276400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51386772-51387771 Phaseolus vulgaris
Phvul.003G276400 2.0kb upstream 2.0kb upstream 3158 true Chr03: 51383614-51386771 Phaseolus vulgaris
Phvul.003G276400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51383614-51385613 Phaseolus vulgaris
Phvul.003G276400 2.0kb downstream 2.0kb downstream 3158 true Chr03: 51385614-51388771 Phaseolus vulgaris
Phvul.003G276400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51386772-51388771 Phaseolus vulgaris
Phvul.003G276400 5.0kb upstream 5.0kb upstream 6158 true Chr03: 51380614-51386771 Phaseolus vulgaris
Phvul.003G276400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51380614-51385613 Phaseolus vulgaris
Phvul.003G276400 5.0kb downstream 5.0kb downstream 6158 true Chr03: 51385614-51391771 Phaseolus vulgaris
Phvul.003G276400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51386772-51391771 Phaseolus vulgaris
Phvul.003G276400 10.0kb upstream 10.0kb upstream 11158 true Chr03: 51375614-51386771 Phaseolus vulgaris
Phvul.003G276400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51375614-51385613 Phaseolus vulgaris
Phvul.003G276400 10.0kb downstream 10.0kb downstream 11158 true Chr03: 51385614-51396771 Phaseolus vulgaris
Phvul.003G276400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51386772-51396771 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310849 5265 Fabidae View MSA
124069609 5270 Rosid View MSA
123744377 5271 Pentapetalae View MSA
122791356 5272 Eudicot View MSA
122049765 5273 Angiosperm View MSA
121344371 5274 Embryophyte View MSA
123426358 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 71.971 0.0 186.386 High  
cufflinks 85.3276 0.0 220.592 High  
cufflinks 54.7246 0.0 143.053 High  
cufflinks 101.531 0.0 262.608 High High
cufflinks 70.7564 0.0 183.55 High  
cufflinks 45.7265 0.0 120.771 High Low
cufflinks 58.8068 0.0 153.177 High  
cufflinks 59.1207 0.0 153.997 High  
cufflinks 85.4733 0.0 220.946 High  
cufflinks 38.9398 0.0 104.233 High Low
cufflinks 75.0947 0.0 194.452 High  

0 Strain