Gene : Phvul.003G276500 P. vulgaris v2.1
Defline:  (1 of 3) K02873 - large subunit ribosomal protein L13e (RP-L13e, RPL13) Genomic Order:  2811
Name:  ? Phvul.003G276500 Secondary Identifier:  ? PAC:37147947
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G276500 0.5kb upstream 0.5kb upstream 1658 true Chr03: 51380950-51382607 Phaseolus vulgaris
Phvul.003G276500 0.5kb upstream 0.5kb upstream 500 false Chr03: 51382108-51382607 Phaseolus vulgaris
Phvul.003G276500 0.5kb downstream 0.5kb downstream 1658 true Chr03: 51380450-51382107 Phaseolus vulgaris
Phvul.003G276500 0.5kb downstream 0.5kb downstream 500 false Chr03: 51380450-51380949 Phaseolus vulgaris
Phvul.003G276500 1.0kb upstream 1.0kb upstream 2158 true Chr03: 51380950-51383107 Phaseolus vulgaris
Phvul.003G276500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51382108-51383107 Phaseolus vulgaris
Phvul.003G276500 1.0kb downstream 1.0kb downstream 2158 true Chr03: 51379950-51382107 Phaseolus vulgaris
Phvul.003G276500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51379950-51380949 Phaseolus vulgaris
Phvul.003G276500 2.0kb upstream 2.0kb upstream 3158 true Chr03: 51380950-51384107 Phaseolus vulgaris
Phvul.003G276500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51382108-51384107 Phaseolus vulgaris
Phvul.003G276500 2.0kb downstream 2.0kb downstream 3158 true Chr03: 51378950-51382107 Phaseolus vulgaris
Phvul.003G276500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51378950-51380949 Phaseolus vulgaris
Phvul.003G276500 5.0kb upstream 5.0kb upstream 6158 true Chr03: 51380950-51387107 Phaseolus vulgaris
Phvul.003G276500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51382108-51387107 Phaseolus vulgaris
Phvul.003G276500 5.0kb downstream 5.0kb downstream 6158 true Chr03: 51375950-51382107 Phaseolus vulgaris
Phvul.003G276500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51375950-51380949 Phaseolus vulgaris
Phvul.003G276500 10.0kb upstream 10.0kb upstream 11158 true Chr03: 51380950-51392107 Phaseolus vulgaris
Phvul.003G276500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51382108-51392107 Phaseolus vulgaris
Phvul.003G276500 10.0kb downstream 10.0kb downstream 11158 true Chr03: 51370950-51382107 Phaseolus vulgaris
Phvul.003G276500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51370950-51380949 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310849 5265 Fabidae View MSA
124069609 5270 Rosid View MSA
123744377 5271 Pentapetalae View MSA
122791356 5272 Eudicot View MSA
122049765 5273 Angiosperm View MSA
121344371 5274 Embryophyte View MSA
123426358 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 72.2273 0.0 187.038 High  
cufflinks 86.0317 0.0 222.403 High  
cufflinks 55.6282 0.0 145.304 High  
cufflinks 101.769 0.0 263.232 High High
cufflinks 71.3555 0.0 185.065 High  
cufflinks 45.2215 0.0 119.522 High Low
cufflinks 58.9504 0.0 153.537 High  
cufflinks 59.871 0.0 155.876 High  
cufflinks 85.936 0.0 222.139 High  
cufflinks 38.9398 0.0 104.233 High Low
cufflinks 74.963 0.0 194.117 High  

0 Strain