Gene : Phvul.003G276600 P. vulgaris v2.1
Defline:  (1 of 4) PTHR17204:SF28 - F1C9.34 PROTEIN-RELATED Genomic Order:  2813
Name:  ? Phvul.003G276600 Secondary Identifier:  ? PAC:37147900
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G276600 0.5kb upstream 0.5kb upstream 2542 true Chr03: 51387244-51389785 Phaseolus vulgaris
Phvul.003G276600 0.5kb upstream 0.5kb upstream 500 false Chr03: 51389286-51389785 Phaseolus vulgaris
Phvul.003G276600 0.5kb downstream 0.5kb downstream 2542 true Chr03: 51386744-51389285 Phaseolus vulgaris
Phvul.003G276600 0.5kb downstream 0.5kb downstream 500 false Chr03: 51386744-51387243 Phaseolus vulgaris
Phvul.003G276600 1.0kb upstream 1.0kb upstream 3042 true Chr03: 51387244-51390285 Phaseolus vulgaris
Phvul.003G276600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51389286-51390285 Phaseolus vulgaris
Phvul.003G276600 1.0kb downstream 1.0kb downstream 3042 true Chr03: 51386244-51389285 Phaseolus vulgaris
Phvul.003G276600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51386244-51387243 Phaseolus vulgaris
Phvul.003G276600 2.0kb upstream 2.0kb upstream 4042 true Chr03: 51387244-51391285 Phaseolus vulgaris
Phvul.003G276600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51389286-51391285 Phaseolus vulgaris
Phvul.003G276600 2.0kb downstream 2.0kb downstream 4042 true Chr03: 51385244-51389285 Phaseolus vulgaris
Phvul.003G276600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51385244-51387243 Phaseolus vulgaris
Phvul.003G276600 5.0kb upstream 5.0kb upstream 7042 true Chr03: 51387244-51394285 Phaseolus vulgaris
Phvul.003G276600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51389286-51394285 Phaseolus vulgaris
Phvul.003G276600 5.0kb downstream 5.0kb downstream 7042 true Chr03: 51382244-51389285 Phaseolus vulgaris
Phvul.003G276600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51382244-51387243 Phaseolus vulgaris
Phvul.003G276600 10.0kb upstream 10.0kb upstream 12042 true Chr03: 51387244-51399285 Phaseolus vulgaris
Phvul.003G276600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51389286-51399285 Phaseolus vulgaris
Phvul.003G276600 10.0kb downstream 10.0kb downstream 12042 true Chr03: 51377244-51389285 Phaseolus vulgaris
Phvul.003G276600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51377244-51387243 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310056 5265 Fabidae View MSA
124062334 5270 Rosid View MSA
123747321 5271 Pentapetalae View MSA
122793961 5272 Eudicot View MSA
122045459 5273 Angiosperm View MSA
121349100 5274 Embryophyte View MSA
123426825 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.6302 0.0 106.179 High High
cufflinks 1.56572 0.0 5.08245    
cufflinks 3.38038 0.0 10.0216    
cufflinks 4.44179 0.0 12.9089    
cufflinks 5.47659 0.0 15.6001    
cufflinks 1.95763 0.0 6.1914    
cufflinks 1.99967 0.0 6.31366    
cufflinks 0.623813 0.0 2.22734   Low
cufflinks 4.27632 0.0 12.3874    
cufflinks 56.1961 0.0 149.908 High High
cufflinks 3.21023 0.0 9.67293    

0 Strain