Gene : Phvul.003G276200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11527//PTHR11527:SF144 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // SUBFAMILY NOT NAMED Genomic Order:  2809
Name:  ? Phvul.003G276200 Secondary Identifier:  ? PAC:37144744
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G276200 0.5kb upstream 0.5kb upstream 2485 true Chr03: 51372196-51374680 Phaseolus vulgaris
Phvul.003G276200 0.5kb upstream 0.5kb upstream 500 false Chr03: 51374181-51374680 Phaseolus vulgaris
Phvul.003G276200 0.5kb downstream 0.5kb downstream 2485 true Chr03: 51371696-51374180 Phaseolus vulgaris
Phvul.003G276200 0.5kb downstream 0.5kb downstream 500 false Chr03: 51371696-51372195 Phaseolus vulgaris
Phvul.003G276200 1.0kb upstream 1.0kb upstream 2985 true Chr03: 51372196-51375180 Phaseolus vulgaris
Phvul.003G276200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 51374181-51375180 Phaseolus vulgaris
Phvul.003G276200 1.0kb downstream 1.0kb downstream 2985 true Chr03: 51371196-51374180 Phaseolus vulgaris
Phvul.003G276200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 51371196-51372195 Phaseolus vulgaris
Phvul.003G276200 2.0kb upstream 2.0kb upstream 3985 true Chr03: 51372196-51376180 Phaseolus vulgaris
Phvul.003G276200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 51374181-51376180 Phaseolus vulgaris
Phvul.003G276200 2.0kb downstream 2.0kb downstream 3985 true Chr03: 51370196-51374180 Phaseolus vulgaris
Phvul.003G276200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 51370196-51372195 Phaseolus vulgaris
Phvul.003G276200 5.0kb upstream 5.0kb upstream 6985 true Chr03: 51372196-51379180 Phaseolus vulgaris
Phvul.003G276200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 51374181-51379180 Phaseolus vulgaris
Phvul.003G276200 5.0kb downstream 5.0kb downstream 6985 true Chr03: 51367196-51374180 Phaseolus vulgaris
Phvul.003G276200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 51367196-51372195 Phaseolus vulgaris
Phvul.003G276200 10.0kb upstream 10.0kb upstream 11985 true Chr03: 51372196-51384180 Phaseolus vulgaris
Phvul.003G276200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 51374181-51384180 Phaseolus vulgaris
Phvul.003G276200 10.0kb downstream 10.0kb downstream 11985 true Chr03: 51362196-51374180 Phaseolus vulgaris
Phvul.003G276200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 51362196-51372195 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312292 5265 Fabidae View MSA
124074314 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.04418 0.0 4.30043    
cufflinks 1.8213 0.0 6.57318    
cufflinks 6.18914 0.0 18.9393    
cufflinks 1.75493 0.0 6.54963    
cufflinks 5.54478 0.0 18.3304    
cufflinks 3.01635 0.0 9.77853    
cufflinks 6.35486 0.0 19.7096    
cufflinks 1.79687 0.0 6.65005    
cufflinks 6.47831 0.0 20.0325    
cufflinks 0.174875 0.0 1.26615 Low Low
cufflinks 6.37582 0.0 19.9253    

0 Strain