Gene : Phvul.003G262700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31161:SF6 - KINECTIN-RELATED PROTEIN Genomic Order:  2674
Name:  ? Phvul.003G262700 Secondary Identifier:  ? PAC:37147342
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G262700 0.5kb upstream 0.5kb upstream 5260 true Chr03: 50173664-50178923 Phaseolus vulgaris
Phvul.003G262700 0.5kb upstream 0.5kb upstream 500 false Chr03: 50173664-50174163 Phaseolus vulgaris
Phvul.003G262700 0.5kb downstream 0.5kb downstream 5260 true Chr03: 50174164-50179423 Phaseolus vulgaris
Phvul.003G262700 0.5kb downstream 0.5kb downstream 500 false Chr03: 50178924-50179423 Phaseolus vulgaris
Phvul.003G262700 1.0kb upstream 1.0kb upstream 5760 true Chr03: 50173164-50178923 Phaseolus vulgaris
Phvul.003G262700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50173164-50174163 Phaseolus vulgaris
Phvul.003G262700 1.0kb downstream 1.0kb downstream 5760 true Chr03: 50174164-50179923 Phaseolus vulgaris
Phvul.003G262700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50178924-50179923 Phaseolus vulgaris
Phvul.003G262700 2.0kb upstream 2.0kb upstream 6760 true Chr03: 50172164-50178923 Phaseolus vulgaris
Phvul.003G262700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50172164-50174163 Phaseolus vulgaris
Phvul.003G262700 2.0kb downstream 2.0kb downstream 6760 true Chr03: 50174164-50180923 Phaseolus vulgaris
Phvul.003G262700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50178924-50180923 Phaseolus vulgaris
Phvul.003G262700 5.0kb upstream 5.0kb upstream 9760 true Chr03: 50169164-50178923 Phaseolus vulgaris
Phvul.003G262700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50169164-50174163 Phaseolus vulgaris
Phvul.003G262700 5.0kb downstream 5.0kb downstream 9760 true Chr03: 50174164-50183923 Phaseolus vulgaris
Phvul.003G262700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50178924-50183923 Phaseolus vulgaris
Phvul.003G262700 10.0kb upstream 10.0kb upstream 14760 true Chr03: 50164164-50178923 Phaseolus vulgaris
Phvul.003G262700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50164164-50174163 Phaseolus vulgaris
Phvul.003G262700 10.0kb downstream 10.0kb downstream 14760 true Chr03: 50174164-50188923 Phaseolus vulgaris
Phvul.003G262700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50178924-50188923 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314136 5265 Fabidae View MSA
124067949 5270 Rosid View MSA
123741403 5271 Pentapetalae View MSA
122792089 5272 Eudicot View MSA
122046615 5273 Angiosperm View MSA
121343979 5274 Embryophyte View MSA
123379950 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.1494 0.0 52.304   High
cufflinks 12.2941 0.0 32.7295    
cufflinks 14.3726 0.0 37.8196    
cufflinks 20.5698 0.0 53.5468   High
cufflinks 11.5523 0.0 31.1454    
cufflinks 8.8319 0.0 24.1319    
cufflinks 8.58406 0.0 23.5109   Low
cufflinks 8.58681 0.0 23.4124   Low
cufflinks 10.2756 0.0 27.772    
cufflinks 16.7065 0.0 43.6954    
cufflinks 9.65838 0.0 26.3293    

0 Strain