Gene : Phvul.003G261400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13208 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 4 Genomic Order:  2661
Name:  ? Phvul.003G261400 Secondary Identifier:  ? PAC:37144782
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G261400 0.5kb upstream 0.5kb upstream 6615 true Chr03: 50088884-50095498 Phaseolus vulgaris
Phvul.003G261400 0.5kb upstream 0.5kb upstream 500 false Chr03: 50088884-50089383 Phaseolus vulgaris
Phvul.003G261400 0.5kb downstream 0.5kb downstream 6615 true Chr03: 50089384-50095998 Phaseolus vulgaris
Phvul.003G261400 0.5kb downstream 0.5kb downstream 500 false Chr03: 50095499-50095998 Phaseolus vulgaris
Phvul.003G261400 1.0kb upstream 1.0kb upstream 7115 true Chr03: 50088384-50095498 Phaseolus vulgaris
Phvul.003G261400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50088384-50089383 Phaseolus vulgaris
Phvul.003G261400 1.0kb downstream 1.0kb downstream 7115 true Chr03: 50089384-50096498 Phaseolus vulgaris
Phvul.003G261400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50095499-50096498 Phaseolus vulgaris
Phvul.003G261400 2.0kb upstream 2.0kb upstream 8115 true Chr03: 50087384-50095498 Phaseolus vulgaris
Phvul.003G261400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50087384-50089383 Phaseolus vulgaris
Phvul.003G261400 2.0kb downstream 2.0kb downstream 8115 true Chr03: 50089384-50097498 Phaseolus vulgaris
Phvul.003G261400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50095499-50097498 Phaseolus vulgaris
Phvul.003G261400 5.0kb upstream 5.0kb upstream 11115 true Chr03: 50084384-50095498 Phaseolus vulgaris
Phvul.003G261400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50084384-50089383 Phaseolus vulgaris
Phvul.003G261400 5.0kb downstream 5.0kb downstream 11115 true Chr03: 50089384-50100498 Phaseolus vulgaris
Phvul.003G261400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50095499-50100498 Phaseolus vulgaris
Phvul.003G261400 10.0kb upstream 10.0kb upstream 16115 true Chr03: 50079384-50095498 Phaseolus vulgaris
Phvul.003G261400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50079384-50089383 Phaseolus vulgaris
Phvul.003G261400 10.0kb downstream 10.0kb downstream 16115 true Chr03: 50089384-50105498 Phaseolus vulgaris
Phvul.003G261400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50095499-50105498 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315116 5265 Fabidae View MSA
124063104 5270 Rosid View MSA
123737443 5271 Pentapetalae View MSA
122786979 5272 Eudicot View MSA
122042269 5273 Angiosperm View MSA
121345208 5274 Embryophyte View MSA
123380175 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.7818 0.0 67.328    
cufflinks 17.2063 0.0 56.2307    
cufflinks 10.3069 0.0 31.5042   Low
cufflinks 23.9616 0.0 76.4197   High
cufflinks 17.9124 0.0 58.8325    
cufflinks 16.3849 0.0 54.4016    
cufflinks 17.2529 0.0 56.715    
cufflinks 16.5067 0.0 54.6746    
cufflinks 19.4661 0.0 63.4618    
cufflinks 19.5522 0.0 63.3443    
cufflinks 21.2902 0.0 61.4388    

0 Strain