Gene : Phvul.003G261300 P. vulgaris v2.1
Defline:  (1 of 5) PTHR24078:SF231 - CHAPERONE PROTEIN DNAJ Genomic Order:  2660
Name:  ? Phvul.003G261300 Secondary Identifier:  ? PAC:37147163
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G261300 0.5kb upstream 0.5kb upstream 956 true Chr03: 50080711-50081666 Phaseolus vulgaris
Phvul.003G261300 0.5kb upstream 0.5kb upstream 500 false Chr03: 50081167-50081666 Phaseolus vulgaris
Phvul.003G261300 0.5kb downstream 0.5kb downstream 956 true Chr03: 50080211-50081166 Phaseolus vulgaris
Phvul.003G261300 0.5kb downstream 0.5kb downstream 500 false Chr03: 50080211-50080710 Phaseolus vulgaris
Phvul.003G261300 1.0kb upstream 1.0kb upstream 1456 true Chr03: 50080711-50082166 Phaseolus vulgaris
Phvul.003G261300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50081167-50082166 Phaseolus vulgaris
Phvul.003G261300 1.0kb downstream 1.0kb downstream 1456 true Chr03: 50079711-50081166 Phaseolus vulgaris
Phvul.003G261300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50079711-50080710 Phaseolus vulgaris
Phvul.003G261300 2.0kb upstream 2.0kb upstream 2456 true Chr03: 50080711-50083166 Phaseolus vulgaris
Phvul.003G261300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50081167-50083166 Phaseolus vulgaris
Phvul.003G261300 2.0kb downstream 2.0kb downstream 2456 true Chr03: 50078711-50081166 Phaseolus vulgaris
Phvul.003G261300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50078711-50080710 Phaseolus vulgaris
Phvul.003G261300 5.0kb upstream 5.0kb upstream 5456 true Chr03: 50080711-50086166 Phaseolus vulgaris
Phvul.003G261300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50081167-50086166 Phaseolus vulgaris
Phvul.003G261300 5.0kb downstream 5.0kb downstream 5456 true Chr03: 50075711-50081166 Phaseolus vulgaris
Phvul.003G261300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50075711-50080710 Phaseolus vulgaris
Phvul.003G261300 10.0kb upstream 10.0kb upstream 10456 true Chr03: 50080711-50091166 Phaseolus vulgaris
Phvul.003G261300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50081167-50091166 Phaseolus vulgaris
Phvul.003G261300 10.0kb downstream 10.0kb downstream 10456 true Chr03: 50070711-50081166 Phaseolus vulgaris
Phvul.003G261300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50070711-50080710 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254180 5265 Fabidae View MSA
124071980 5270 Rosid View MSA
123753518 5271 Pentapetalae View MSA
122797813 5272 Eudicot View MSA
122049944 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121350989 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 100.312 0.0 262.251 High High
cufflinks 0.69523 0.0 2.90089    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 135.443 0.0 350.141 High High
cufflinks 0.384999 0.0 1.68624 Low  
cufflinks 0.164294 0.0 0.792145 Low  
cufflinks 1.73321 0.0 6.70517    
cufflinks 0.751701 0.0 3.12757    
cufflinks 0.427908 0.0 1.85838 Low  
cufflinks 0.127841 0.0 0.631025 Low  
cufflinks 0.114373 0.0 0.567408 Low  

0 Strain