Gene : Phvul.003G264500 P. vulgaris v2.1
Defline:  (1 of 6) PF06911 - Senescence-associated protein (Senescence) Genomic Order:  2692
Name:  ? Phvul.003G264500 Secondary Identifier:  ? PAC:37144990
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G264500 0.5kb upstream 0.5kb upstream 3111 true Chr03: 50322607-50325717 Phaseolus vulgaris
Phvul.003G264500 0.5kb upstream 0.5kb upstream 500 false Chr03: 50322607-50323106 Phaseolus vulgaris
Phvul.003G264500 0.5kb downstream 0.5kb downstream 3111 true Chr03: 50323107-50326217 Phaseolus vulgaris
Phvul.003G264500 0.5kb downstream 0.5kb downstream 500 false Chr03: 50325718-50326217 Phaseolus vulgaris
Phvul.003G264500 1.0kb upstream 1.0kb upstream 3611 true Chr03: 50322107-50325717 Phaseolus vulgaris
Phvul.003G264500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50322107-50323106 Phaseolus vulgaris
Phvul.003G264500 1.0kb downstream 1.0kb downstream 3611 true Chr03: 50323107-50326717 Phaseolus vulgaris
Phvul.003G264500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50325718-50326717 Phaseolus vulgaris
Phvul.003G264500 2.0kb upstream 2.0kb upstream 4611 true Chr03: 50321107-50325717 Phaseolus vulgaris
Phvul.003G264500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50321107-50323106 Phaseolus vulgaris
Phvul.003G264500 2.0kb downstream 2.0kb downstream 4611 true Chr03: 50323107-50327717 Phaseolus vulgaris
Phvul.003G264500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50325718-50327717 Phaseolus vulgaris
Phvul.003G264500 5.0kb upstream 5.0kb upstream 7611 true Chr03: 50318107-50325717 Phaseolus vulgaris
Phvul.003G264500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50318107-50323106 Phaseolus vulgaris
Phvul.003G264500 5.0kb downstream 5.0kb downstream 7611 true Chr03: 50323107-50330717 Phaseolus vulgaris
Phvul.003G264500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50325718-50330717 Phaseolus vulgaris
Phvul.003G264500 10.0kb upstream 10.0kb upstream 12611 true Chr03: 50313107-50325717 Phaseolus vulgaris
Phvul.003G264500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50313107-50323106 Phaseolus vulgaris
Phvul.003G264500 10.0kb downstream 10.0kb downstream 12611 true Chr03: 50323107-50335717 Phaseolus vulgaris
Phvul.003G264500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50325718-50335717 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314180 5265 Fabidae View MSA
124072707 5270 Rosid View MSA
123750901 5271 Pentapetalae View MSA
122796418 5272 Eudicot View MSA
122046624 5273 Angiosperm View MSA
121350646 5274 Embryophyte View MSA
123428517 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0542743 0.0 0.23338 Low  
cufflinks 0.0132707 0.0 0.0662823 Low Low
cufflinks 0.386017 0.0 1.42364 Low High
cufflinks 0.457213 0.0 1.65991 Low High
cufflinks 0.0234806 0.0 0.110254 Low  
cufflinks 0.310825 0.0 1.1634 Low High
cufflinks 0.0146321 0.0 0.0716608 Low  
cufflinks 0.0115827 0.0 0.0586458 Low Low
cufflinks 0.08 0.0 0.331827 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0272552 0.0 0.12557 Low  

0 Strain