Gene : Phvul.003G262900 P. vulgaris v2.1
Defline:  (1 of 4) K02938 - large subunit ribosomal protein L8e (RP-L8e, RPL8) Genomic Order:  2676
Name:  ? Phvul.003G262900 Secondary Identifier:  ? PAC:37144514
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G262900 0.5kb upstream 0.5kb upstream 1948 true Chr03: 50195981-50197928 Phaseolus vulgaris
Phvul.003G262900 0.5kb upstream 0.5kb upstream 500 false Chr03: 50195981-50196480 Phaseolus vulgaris
Phvul.003G262900 0.5kb downstream 0.5kb downstream 1948 true Chr03: 50196481-50198428 Phaseolus vulgaris
Phvul.003G262900 0.5kb downstream 0.5kb downstream 500 false Chr03: 50197929-50198428 Phaseolus vulgaris
Phvul.003G262900 1.0kb upstream 1.0kb upstream 2448 true Chr03: 50195481-50197928 Phaseolus vulgaris
Phvul.003G262900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50195481-50196480 Phaseolus vulgaris
Phvul.003G262900 1.0kb downstream 1.0kb downstream 2448 true Chr03: 50196481-50198928 Phaseolus vulgaris
Phvul.003G262900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50197929-50198928 Phaseolus vulgaris
Phvul.003G262900 2.0kb upstream 2.0kb upstream 3448 true Chr03: 50194481-50197928 Phaseolus vulgaris
Phvul.003G262900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50194481-50196480 Phaseolus vulgaris
Phvul.003G262900 2.0kb downstream 2.0kb downstream 3448 true Chr03: 50196481-50199928 Phaseolus vulgaris
Phvul.003G262900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50197929-50199928 Phaseolus vulgaris
Phvul.003G262900 5.0kb upstream 5.0kb upstream 6448 true Chr03: 50191481-50197928 Phaseolus vulgaris
Phvul.003G262900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50191481-50196480 Phaseolus vulgaris
Phvul.003G262900 5.0kb downstream 5.0kb downstream 6448 true Chr03: 50196481-50202928 Phaseolus vulgaris
Phvul.003G262900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50197929-50202928 Phaseolus vulgaris
Phvul.003G262900 10.0kb upstream 10.0kb upstream 11448 true Chr03: 50186481-50197928 Phaseolus vulgaris
Phvul.003G262900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50186481-50196480 Phaseolus vulgaris
Phvul.003G262900 10.0kb downstream 10.0kb downstream 11448 true Chr03: 50196481-50207928 Phaseolus vulgaris
Phvul.003G262900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50197929-50207928 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312970 5265 Fabidae View MSA
124067986 5270 Rosid View MSA
123745881 5271 Pentapetalae View MSA
122789259 5272 Eudicot View MSA
122042559 5273 Angiosperm View MSA
121350897 5274 Embryophyte View MSA
123424033 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 102.529 0.0 272.716 High  
cufflinks 159.916 0.0 444.313 High  
cufflinks 70.346 0.0 183.314 High Low
cufflinks 158.268 0.0 440.466 High  
cufflinks 151.439 0.0 418.919 High  
cufflinks 75.1482 0.0 196.478 High Low
cufflinks 110.136 0.0 295.922 High  
cufflinks 115.803 0.0 311.237 High  
cufflinks 175.599 0.0 493.823 High High
cufflinks 58.0593 0.0 150.53 High Low
cufflinks 138.683 0.0 380.792 High  

0 Strain