Gene : Phvul.003G263700 P. vulgaris v2.1
Defline:  (1 of 5) PTHR22601//PTHR22601:SF12 - ISP4 LIKE PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2684
Name:  ? Phvul.003G263700 Secondary Identifier:  ? PAC:37145054
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G263700 0.5kb upstream 0.5kb upstream 4567 true Chr03: 50265909-50270475 Phaseolus vulgaris
Phvul.003G263700 0.5kb upstream 0.5kb upstream 500 false Chr03: 50269976-50270475 Phaseolus vulgaris
Phvul.003G263700 0.5kb downstream 0.5kb downstream 4567 true Chr03: 50265409-50269975 Phaseolus vulgaris
Phvul.003G263700 0.5kb downstream 0.5kb downstream 500 false Chr03: 50265409-50265908 Phaseolus vulgaris
Phvul.003G263700 1.0kb upstream 1.0kb upstream 5067 true Chr03: 50265909-50270975 Phaseolus vulgaris
Phvul.003G263700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50269976-50270975 Phaseolus vulgaris
Phvul.003G263700 1.0kb downstream 1.0kb downstream 5067 true Chr03: 50264909-50269975 Phaseolus vulgaris
Phvul.003G263700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50264909-50265908 Phaseolus vulgaris
Phvul.003G263700 2.0kb upstream 2.0kb upstream 6067 true Chr03: 50265909-50271975 Phaseolus vulgaris
Phvul.003G263700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50269976-50271975 Phaseolus vulgaris
Phvul.003G263700 2.0kb downstream 2.0kb downstream 6067 true Chr03: 50263909-50269975 Phaseolus vulgaris
Phvul.003G263700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50263909-50265908 Phaseolus vulgaris
Phvul.003G263700 5.0kb upstream 5.0kb upstream 9067 true Chr03: 50265909-50274975 Phaseolus vulgaris
Phvul.003G263700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50269976-50274975 Phaseolus vulgaris
Phvul.003G263700 5.0kb downstream 5.0kb downstream 9067 true Chr03: 50260909-50269975 Phaseolus vulgaris
Phvul.003G263700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50260909-50265908 Phaseolus vulgaris
Phvul.003G263700 10.0kb upstream 10.0kb upstream 14067 true Chr03: 50265909-50279975 Phaseolus vulgaris
Phvul.003G263700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50269976-50279975 Phaseolus vulgaris
Phvul.003G263700 10.0kb downstream 10.0kb downstream 14067 true Chr03: 50255909-50269975 Phaseolus vulgaris
Phvul.003G263700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50255909-50265908 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303018 5265 Fabidae View MSA
124073714 5270 Rosid View MSA
123750200 5271 Pentapetalae View MSA
122797569 5272 Eudicot View MSA
122049856 5273 Angiosperm View MSA
121351141 5274 Embryophyte View MSA
123382023 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.403726 0.0 1.77826 Low Low
cufflinks 0.610335 0.0 2.56767   Low
cufflinks 3.69271 0.0 12.5436   High
cufflinks 1.4024 0.0 4.78258    
cufflinks 3.0179 0.0 14.5232    
cufflinks 0.931201 0.0 4.56055    
cufflinks 4.16077 0.0 17.8623   High
cufflinks 1.73951 0.0 9.38448    
cufflinks 3.89397 0.0 18.696   High
cufflinks 1.49006 0.0 8.6256    
cufflinks 1.5898 0.0 6.7716    

0 Strain