Gene : Phvul.003G266800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13018//PTHR13018:SF52 - PROBABLE MEMBRANE PROTEIN DUF221-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2714
Name:  ? Phvul.003G266800 Secondary Identifier:  ? PAC:37147457
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G266800 0.5kb upstream 0.5kb upstream 3677 true Chr03: 50501419-50505095 Phaseolus vulgaris
Phvul.003G266800 0.5kb upstream 0.5kb upstream 500 false Chr03: 50504596-50505095 Phaseolus vulgaris
Phvul.003G266800 0.5kb downstream 0.5kb downstream 3677 true Chr03: 50500919-50504595 Phaseolus vulgaris
Phvul.003G266800 0.5kb downstream 0.5kb downstream 500 false Chr03: 50500919-50501418 Phaseolus vulgaris
Phvul.003G266800 1.0kb upstream 1.0kb upstream 4177 true Chr03: 50501419-50505595 Phaseolus vulgaris
Phvul.003G266800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50504596-50505595 Phaseolus vulgaris
Phvul.003G266800 1.0kb downstream 1.0kb downstream 4177 true Chr03: 50500419-50504595 Phaseolus vulgaris
Phvul.003G266800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50500419-50501418 Phaseolus vulgaris
Phvul.003G266800 2.0kb upstream 2.0kb upstream 5177 true Chr03: 50501419-50506595 Phaseolus vulgaris
Phvul.003G266800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50504596-50506595 Phaseolus vulgaris
Phvul.003G266800 2.0kb downstream 2.0kb downstream 5177 true Chr03: 50499419-50504595 Phaseolus vulgaris
Phvul.003G266800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50499419-50501418 Phaseolus vulgaris
Phvul.003G266800 5.0kb upstream 5.0kb upstream 8177 true Chr03: 50501419-50509595 Phaseolus vulgaris
Phvul.003G266800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50504596-50509595 Phaseolus vulgaris
Phvul.003G266800 5.0kb downstream 5.0kb downstream 8177 true Chr03: 50496419-50504595 Phaseolus vulgaris
Phvul.003G266800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50496419-50501418 Phaseolus vulgaris
Phvul.003G266800 10.0kb upstream 10.0kb upstream 13177 true Chr03: 50501419-50514595 Phaseolus vulgaris
Phvul.003G266800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50504596-50514595 Phaseolus vulgaris
Phvul.003G266800 10.0kb downstream 10.0kb downstream 13177 true Chr03: 50491419-50504595 Phaseolus vulgaris
Phvul.003G266800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50491419-50501418 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301090 5265 Fabidae View MSA
124065906 5270 Rosid View MSA
123738845 5271 Pentapetalae View MSA
122789158 5272 Eudicot View MSA
122043002 5273 Angiosperm View MSA
121310062 5274 Embryophyte View MSA
123347658 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.09509 0.0 21.2337   Low
cufflinks 9.80789 0.0 25.535    
cufflinks 10.3067 0.0 26.7933    
cufflinks 8.5003 0.0 22.2952    
cufflinks 11.5696 0.0 29.9686    
cufflinks 11.5647 0.0 29.9695    
cufflinks 9.16391 0.0 23.9004    
cufflinks 7.46068 0.0 19.6777   Low
cufflinks 11.7603 0.0 30.4781   High
cufflinks 10.7503 0.0 27.8958    
cufflinks 10.9896 0.0 28.5017    

0 Strain