Gene : Phvul.003G265300 P. vulgaris v2.1
Defline:  (1 of 2) PF03941 - Inner centromere protein, ARK binding region (INCENP_ARK-bind) Genomic Order:  2699
Name:  ? Phvul.003G265300 Secondary Identifier:  ? PAC:37146353
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G265300 0.5kb upstream 0.5kb upstream 8992 true Chr03: 50371259-50380250 Phaseolus vulgaris
Phvul.003G265300 0.5kb upstream 0.5kb upstream 500 false Chr03: 50379751-50380250 Phaseolus vulgaris
Phvul.003G265300 0.5kb downstream 0.5kb downstream 8992 true Chr03: 50370759-50379750 Phaseolus vulgaris
Phvul.003G265300 0.5kb downstream 0.5kb downstream 500 false Chr03: 50370759-50371258 Phaseolus vulgaris
Phvul.003G265300 1.0kb upstream 1.0kb upstream 9492 true Chr03: 50371259-50380750 Phaseolus vulgaris
Phvul.003G265300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50379751-50380750 Phaseolus vulgaris
Phvul.003G265300 1.0kb downstream 1.0kb downstream 9492 true Chr03: 50370259-50379750 Phaseolus vulgaris
Phvul.003G265300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50370259-50371258 Phaseolus vulgaris
Phvul.003G265300 2.0kb upstream 2.0kb upstream 10492 true Chr03: 50371259-50381750 Phaseolus vulgaris
Phvul.003G265300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50379751-50381750 Phaseolus vulgaris
Phvul.003G265300 2.0kb downstream 2.0kb downstream 10492 true Chr03: 50369259-50379750 Phaseolus vulgaris
Phvul.003G265300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50369259-50371258 Phaseolus vulgaris
Phvul.003G265300 5.0kb upstream 5.0kb upstream 13492 true Chr03: 50371259-50384750 Phaseolus vulgaris
Phvul.003G265300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50379751-50384750 Phaseolus vulgaris
Phvul.003G265300 5.0kb downstream 5.0kb downstream 13492 true Chr03: 50366259-50379750 Phaseolus vulgaris
Phvul.003G265300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50366259-50371258 Phaseolus vulgaris
Phvul.003G265300 10.0kb upstream 10.0kb upstream 18492 true Chr03: 50371259-50389750 Phaseolus vulgaris
Phvul.003G265300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50379751-50389750 Phaseolus vulgaris
Phvul.003G265300 10.0kb downstream 10.0kb downstream 18492 true Chr03: 50361259-50379750 Phaseolus vulgaris
Phvul.003G265300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50361259-50371258 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311189 5265 Fabidae View MSA
124060562 5270 Rosid View MSA
123741060 5271 Pentapetalae View MSA
122794023 5272 Eudicot View MSA
122049867 5273 Angiosperm View MSA
121311623 5274 Embryophyte View MSA
123348896 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.362378 0.0 1.85358 Low Low
cufflinks 1.56556 0.0 5.3948    
cufflinks 1.6973 0.0 5.76135    
cufflinks 0.600645 0.0 2.10082   Low
cufflinks 1.33527 0.0 4.93952    
cufflinks 3.23358 0.0 9.70148    
cufflinks 3.51679 0.0 10.7575   High
cufflinks 3.89807 0.0 11.6215   High
cufflinks 2.69657 0.0 8.3445    
cufflinks 2.23955 0.0 7.47534    
cufflinks 0.877325 0.0 3.58039    

0 Strain