Gene : Phvul.003G265900 P. vulgaris v2.1
Defline:  (1 of 4) K03094 - S-phase kinase-associated protein 1 (SKP1, CBF3D) Genomic Order:  2705
Name:  ? Phvul.003G265900 Secondary Identifier:  ? PAC:37147199
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G265900 0.5kb upstream 0.5kb upstream 2260 true Chr03: 50423880-50426139 Phaseolus vulgaris
Phvul.003G265900 0.5kb upstream 0.5kb upstream 500 false Chr03: 50423880-50424379 Phaseolus vulgaris
Phvul.003G265900 0.5kb downstream 0.5kb downstream 2260 true Chr03: 50424380-50426639 Phaseolus vulgaris
Phvul.003G265900 0.5kb downstream 0.5kb downstream 500 false Chr03: 50426140-50426639 Phaseolus vulgaris
Phvul.003G265900 1.0kb upstream 1.0kb upstream 2760 true Chr03: 50423380-50426139 Phaseolus vulgaris
Phvul.003G265900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50423380-50424379 Phaseolus vulgaris
Phvul.003G265900 1.0kb downstream 1.0kb downstream 2760 true Chr03: 50424380-50427139 Phaseolus vulgaris
Phvul.003G265900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50426140-50427139 Phaseolus vulgaris
Phvul.003G265900 2.0kb upstream 2.0kb upstream 3760 true Chr03: 50422380-50426139 Phaseolus vulgaris
Phvul.003G265900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50422380-50424379 Phaseolus vulgaris
Phvul.003G265900 2.0kb downstream 2.0kb downstream 3760 true Chr03: 50424380-50428139 Phaseolus vulgaris
Phvul.003G265900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50426140-50428139 Phaseolus vulgaris
Phvul.003G265900 5.0kb upstream 5.0kb upstream 6760 true Chr03: 50419380-50426139 Phaseolus vulgaris
Phvul.003G265900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50419380-50424379 Phaseolus vulgaris
Phvul.003G265900 5.0kb downstream 5.0kb downstream 6760 true Chr03: 50424380-50431139 Phaseolus vulgaris
Phvul.003G265900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50426140-50431139 Phaseolus vulgaris
Phvul.003G265900 10.0kb upstream 10.0kb upstream 11760 true Chr03: 50414380-50426139 Phaseolus vulgaris
Phvul.003G265900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50414380-50424379 Phaseolus vulgaris
Phvul.003G265900 10.0kb downstream 10.0kb downstream 11760 true Chr03: 50424380-50436139 Phaseolus vulgaris
Phvul.003G265900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50426140-50436139 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303733 5265 Fabidae View MSA
124067462 5270 Rosid View MSA
123744391 5271 Pentapetalae View MSA
122796189 5272 Eudicot View MSA
122048755 5273 Angiosperm View MSA
121348588 5274 Embryophyte View MSA
123428431 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 429.275 0.0 1334.04 High High
cufflinks 276.963 0.0 805.587 High  
cufflinks 241.436 0.0 687.631 High  
cufflinks 383.525 0.0 1165.01 High High
cufflinks 216.395 0.0 607.758 High  
cufflinks 201.58 0.0 563.744 High  
cufflinks 180.377 0.0 501.188 High  
cufflinks 173.728 0.0 479.708 High Low
cufflinks 184.821 0.0 514.897 High  
cufflinks 181.765 0.0 501.985 High  
cufflinks 307.505 0.0 905.401 High  

0 Strain