Gene : Phvul.003G269400 P. vulgaris v2.1
Defline:  (1 of 4) 3.1.3.66 - Phosphatidylinositol-3,4-bisphosphate 4-phosphatase / Phosphoinositide 4-phosphatase Genomic Order:  2741
Name:  ? Phvul.003G269400 Secondary Identifier:  ? PAC:37147238
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-6368 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G269400 0.5kb upstream 0.5kb upstream 16492 true Chr03: 50699580-50716071 Phaseolus vulgaris
Phvul.003G269400 0.5kb upstream 0.5kb upstream 500 false Chr03: 50699580-50700079 Phaseolus vulgaris
Phvul.003G269400 0.5kb downstream 0.5kb downstream 16492 true Chr03: 50700080-50716571 Phaseolus vulgaris
Phvul.003G269400 0.5kb downstream 0.5kb downstream 500 false Chr03: 50716072-50716571 Phaseolus vulgaris
Phvul.003G269400 1.0kb upstream 1.0kb upstream 16992 true Chr03: 50699080-50716071 Phaseolus vulgaris
Phvul.003G269400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50699080-50700079 Phaseolus vulgaris
Phvul.003G269400 1.0kb downstream 1.0kb downstream 16992 true Chr03: 50700080-50717071 Phaseolus vulgaris
Phvul.003G269400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50716072-50717071 Phaseolus vulgaris
Phvul.003G269400 2.0kb upstream 2.0kb upstream 17992 true Chr03: 50698080-50716071 Phaseolus vulgaris
Phvul.003G269400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50698080-50700079 Phaseolus vulgaris
Phvul.003G269400 2.0kb downstream 2.0kb downstream 17992 true Chr03: 50700080-50718071 Phaseolus vulgaris
Phvul.003G269400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50716072-50718071 Phaseolus vulgaris
Phvul.003G269400 5.0kb upstream 5.0kb upstream 20992 true Chr03: 50695080-50716071 Phaseolus vulgaris
Phvul.003G269400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50695080-50700079 Phaseolus vulgaris
Phvul.003G269400 5.0kb downstream 5.0kb downstream 20992 true Chr03: 50700080-50721071 Phaseolus vulgaris
Phvul.003G269400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50716072-50721071 Phaseolus vulgaris
Phvul.003G269400 10.0kb upstream 10.0kb upstream 25992 true Chr03: 50690080-50716071 Phaseolus vulgaris
Phvul.003G269400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50690080-50700079 Phaseolus vulgaris
Phvul.003G269400 10.0kb downstream 10.0kb downstream 25992 true Chr03: 50700080-50726071 Phaseolus vulgaris
Phvul.003G269400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50716072-50726071 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307611 5265 Fabidae View MSA
124069154 5270 Rosid View MSA
123751013 5271 Pentapetalae View MSA
122793710 5272 Eudicot View MSA
122044264 5273 Angiosperm View MSA
121351625 5274 Embryophyte View MSA
123428410 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.086389 0.0 0.358351 Low  
cufflinks 0.14098 0.0 0.56435 Low  
cufflinks 0.568474 0.0 2.02473   High
cufflinks 1.12949 0.0 3.76983   High
cufflinks 0.0530104 0.0 0.232178 Low  
cufflinks 0.0970931 0.0 0.400452 Low  
cufflinks 0.0508393 0.0 0.222402 Low  
cufflinks 0.095876 0.0 0.39449 Low  
cufflinks 0.0189078 0.0 0.0918381 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0470794 0.0 0.208293 Low  

0 Strain