Gene : Phvul.003G258300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23421:SF79 - BETA-GALACTOSIDASE 3 Genomic Order:  2631
Name:  ? Phvul.003G258300 Secondary Identifier:  ? PAC:37147573
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G258300 0.5kb upstream 0.5kb upstream 6287 true Chr03: 49791140-49797426 Phaseolus vulgaris
Phvul.003G258300 0.5kb upstream 0.5kb upstream 500 false Chr03: 49796927-49797426 Phaseolus vulgaris
Phvul.003G258300 0.5kb downstream 0.5kb downstream 6287 true Chr03: 49790640-49796926 Phaseolus vulgaris
Phvul.003G258300 0.5kb downstream 0.5kb downstream 500 false Chr03: 49790640-49791139 Phaseolus vulgaris
Phvul.003G258300 1.0kb upstream 1.0kb upstream 6787 true Chr03: 49791140-49797926 Phaseolus vulgaris
Phvul.003G258300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 49796927-49797926 Phaseolus vulgaris
Phvul.003G258300 1.0kb downstream 1.0kb downstream 6787 true Chr03: 49790140-49796926 Phaseolus vulgaris
Phvul.003G258300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 49790140-49791139 Phaseolus vulgaris
Phvul.003G258300 2.0kb upstream 2.0kb upstream 7787 true Chr03: 49791140-49798926 Phaseolus vulgaris
Phvul.003G258300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 49796927-49798926 Phaseolus vulgaris
Phvul.003G258300 2.0kb downstream 2.0kb downstream 7787 true Chr03: 49789140-49796926 Phaseolus vulgaris
Phvul.003G258300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 49789140-49791139 Phaseolus vulgaris
Phvul.003G258300 5.0kb upstream 5.0kb upstream 10787 true Chr03: 49791140-49801926 Phaseolus vulgaris
Phvul.003G258300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 49796927-49801926 Phaseolus vulgaris
Phvul.003G258300 5.0kb downstream 5.0kb downstream 10787 true Chr03: 49786140-49796926 Phaseolus vulgaris
Phvul.003G258300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 49786140-49791139 Phaseolus vulgaris
Phvul.003G258300 10.0kb upstream 10.0kb upstream 15787 true Chr03: 49791140-49806926 Phaseolus vulgaris
Phvul.003G258300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 49796927-49806926 Phaseolus vulgaris
Phvul.003G258300 10.0kb downstream 10.0kb downstream 15787 true Chr03: 49781140-49796926 Phaseolus vulgaris
Phvul.003G258300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 49781140-49791139 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310956 5265 Fabidae View MSA
124073116 5270 Rosid View MSA
123744970 5271 Pentapetalae View MSA
122787438 5272 Eudicot View MSA
122044679 5273 Angiosperm View MSA
121310326 5274 Embryophyte View MSA
123347842 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.1925 0.0 16.2948   Low
cufflinks 35.5215 0.0 97.4157 High  
cufflinks 29.5009 0.0 79.6354    
cufflinks 36.1248 0.0 98.4697 High  
cufflinks 54.9938 0.0 157.212 High  
cufflinks 51.8997 0.0 148.555 High  
cufflinks 23.7596 0.0 63.0782    
cufflinks 5.48137 0.0 14.4863   Low
cufflinks 14.3181 0.0 37.0934    
cufflinks 9.19499 0.0 23.8269   Low
cufflinks 69.7738 0.0 206.317 High High

0 Strain