Gene : Phvul.003G253800 P. vulgaris v2.1
Defline:  (1 of 1) K06287 - septum formation protein (maf) Genomic Order:  2584
Name:  ? Phvul.003G253800 Secondary Identifier:  ? PAC:37147728
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G253800 0.5kb upstream 0.5kb upstream 4210 true Chr03: 49289956-49294165 Phaseolus vulgaris
Phvul.003G253800 0.5kb upstream 0.5kb upstream 500 false Chr03: 49289956-49290455 Phaseolus vulgaris
Phvul.003G253800 0.5kb downstream 0.5kb downstream 4210 true Chr03: 49290456-49294665 Phaseolus vulgaris
Phvul.003G253800 0.5kb downstream 0.5kb downstream 500 false Chr03: 49294166-49294665 Phaseolus vulgaris
Phvul.003G253800 1.0kb upstream 1.0kb upstream 4710 true Chr03: 49289456-49294165 Phaseolus vulgaris
Phvul.003G253800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 49289456-49290455 Phaseolus vulgaris
Phvul.003G253800 1.0kb downstream 1.0kb downstream 4710 true Chr03: 49290456-49295165 Phaseolus vulgaris
Phvul.003G253800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 49294166-49295165 Phaseolus vulgaris
Phvul.003G253800 2.0kb upstream 2.0kb upstream 5710 true Chr03: 49288456-49294165 Phaseolus vulgaris
Phvul.003G253800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 49288456-49290455 Phaseolus vulgaris
Phvul.003G253800 2.0kb downstream 2.0kb downstream 5710 true Chr03: 49290456-49296165 Phaseolus vulgaris
Phvul.003G253800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 49294166-49296165 Phaseolus vulgaris
Phvul.003G253800 5.0kb upstream 5.0kb upstream 8710 true Chr03: 49285456-49294165 Phaseolus vulgaris
Phvul.003G253800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 49285456-49290455 Phaseolus vulgaris
Phvul.003G253800 5.0kb downstream 5.0kb downstream 8710 true Chr03: 49290456-49299165 Phaseolus vulgaris
Phvul.003G253800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 49294166-49299165 Phaseolus vulgaris
Phvul.003G253800 10.0kb upstream 10.0kb upstream 13710 true Chr03: 49280456-49294165 Phaseolus vulgaris
Phvul.003G253800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 49280456-49290455 Phaseolus vulgaris
Phvul.003G253800 10.0kb downstream 10.0kb downstream 13710 true Chr03: 49290456-49304165 Phaseolus vulgaris
Phvul.003G253800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 49294166-49304165 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302921 5265 Fabidae View MSA
124065460 5270 Rosid View MSA
123742079 5271 Pentapetalae View MSA
122790099 5272 Eudicot View MSA
122045669 5273 Angiosperm View MSA
121347130 5274 Embryophyte View MSA
123427064 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.72843 0.0 12.2343    
cufflinks 3.10427 0.0 13.5261    
cufflinks 24.362 0.0 78.9471   High
cufflinks 3.56884 0.0 15.367    
cufflinks 2.39106 0.0 11.4617    
cufflinks 10.0382 0.0 32.773   High
cufflinks 2.73691 0.0 12.3391    
cufflinks 5.41607 0.0 20.2837    
cufflinks 1.75104 0.0 9.07652   Low
cufflinks 2.39327 0.0 11.2243    
cufflinks 3.13447 0.0 13.8006    

0 Strain