Gene : Phvul.003G257900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10992//PTHR10992:SF804 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2627
Name:  ? Phvul.003G257900 Secondary Identifier:  ? PAC:37147161
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G257900 0.5kb upstream 0.5kb upstream 2488 true Chr03: 49701724-49704211 Phaseolus vulgaris
Phvul.003G257900 0.5kb upstream 0.5kb upstream 500 false Chr03: 49703712-49704211 Phaseolus vulgaris
Phvul.003G257900 0.5kb downstream 0.5kb downstream 2488 true Chr03: 49701224-49703711 Phaseolus vulgaris
Phvul.003G257900 0.5kb downstream 0.5kb downstream 500 false Chr03: 49701224-49701723 Phaseolus vulgaris
Phvul.003G257900 1.0kb upstream 1.0kb upstream 2988 true Chr03: 49701724-49704711 Phaseolus vulgaris
Phvul.003G257900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 49703712-49704711 Phaseolus vulgaris
Phvul.003G257900 1.0kb downstream 1.0kb downstream 2988 true Chr03: 49700724-49703711 Phaseolus vulgaris
Phvul.003G257900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 49700724-49701723 Phaseolus vulgaris
Phvul.003G257900 2.0kb upstream 2.0kb upstream 3988 true Chr03: 49701724-49705711 Phaseolus vulgaris
Phvul.003G257900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 49703712-49705711 Phaseolus vulgaris
Phvul.003G257900 2.0kb downstream 2.0kb downstream 3988 true Chr03: 49699724-49703711 Phaseolus vulgaris
Phvul.003G257900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 49699724-49701723 Phaseolus vulgaris
Phvul.003G257900 5.0kb upstream 5.0kb upstream 6988 true Chr03: 49701724-49708711 Phaseolus vulgaris
Phvul.003G257900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 49703712-49708711 Phaseolus vulgaris
Phvul.003G257900 5.0kb downstream 5.0kb downstream 6988 true Chr03: 49696724-49703711 Phaseolus vulgaris
Phvul.003G257900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 49696724-49701723 Phaseolus vulgaris
Phvul.003G257900 10.0kb upstream 10.0kb upstream 11988 true Chr03: 49701724-49713711 Phaseolus vulgaris
Phvul.003G257900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 49703712-49713711 Phaseolus vulgaris
Phvul.003G257900 10.0kb downstream 10.0kb downstream 11988 true Chr03: 49691724-49703711 Phaseolus vulgaris
Phvul.003G257900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 49691724-49701723 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301231 5265 Fabidae View MSA
124072548 5270 Rosid View MSA
123741545 5271 Pentapetalae View MSA
122770077 5272 Eudicot View MSA
122048317 5273 Angiosperm View MSA
121350618 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.7763 0.0 49.8492   High
cufflinks 8.03385 0.0 22.9231    
cufflinks 0.621651 0.0 2.32065   Low
cufflinks 3.02917 0.0 9.69279    
cufflinks 1.48206 0.0 5.15795   Low
cufflinks 1.70433 0.0 5.78036    
cufflinks 18.0629 0.0 48.0456   High
cufflinks 16.7711 0.0 44.71   High
cufflinks 13.6591 0.0 37.2163    
cufflinks 6.2436 0.0 18.3412    
cufflinks 3.32121 0.0 10.5336    

0 Strain