Gene : Phvul.003G260500 P. vulgaris v2.1
Defline:  (1 of 91) PF02365 - No apical meristem (NAM) protein (NAM) Genomic Order:  2652
Name:  ? Phvul.003G260500 Secondary Identifier:  ? PAC:37148028
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G260500 0.5kb upstream 0.5kb upstream 3936 true Chr03: 49994952-49998887 Phaseolus vulgaris
Phvul.003G260500 0.5kb upstream 0.5kb upstream 500 false Chr03: 49998388-49998887 Phaseolus vulgaris
Phvul.003G260500 0.5kb downstream 0.5kb downstream 3936 true Chr03: 49994452-49998387 Phaseolus vulgaris
Phvul.003G260500 0.5kb downstream 0.5kb downstream 500 false Chr03: 49994452-49994951 Phaseolus vulgaris
Phvul.003G260500 1.0kb upstream 1.0kb upstream 4436 true Chr03: 49994952-49999387 Phaseolus vulgaris
Phvul.003G260500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 49998388-49999387 Phaseolus vulgaris
Phvul.003G260500 1.0kb downstream 1.0kb downstream 4436 true Chr03: 49993952-49998387 Phaseolus vulgaris
Phvul.003G260500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 49993952-49994951 Phaseolus vulgaris
Phvul.003G260500 2.0kb upstream 2.0kb upstream 5436 true Chr03: 49994952-50000387 Phaseolus vulgaris
Phvul.003G260500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 49998388-50000387 Phaseolus vulgaris
Phvul.003G260500 2.0kb downstream 2.0kb downstream 5436 true Chr03: 49992952-49998387 Phaseolus vulgaris
Phvul.003G260500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 49992952-49994951 Phaseolus vulgaris
Phvul.003G260500 5.0kb upstream 5.0kb upstream 8436 true Chr03: 49994952-50003387 Phaseolus vulgaris
Phvul.003G260500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 49998388-50003387 Phaseolus vulgaris
Phvul.003G260500 5.0kb downstream 5.0kb downstream 8436 true Chr03: 49989952-49998387 Phaseolus vulgaris
Phvul.003G260500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 49989952-49994951 Phaseolus vulgaris
Phvul.003G260500 10.0kb upstream 10.0kb upstream 13436 true Chr03: 49994952-50008387 Phaseolus vulgaris
Phvul.003G260500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 49998388-50008387 Phaseolus vulgaris
Phvul.003G260500 10.0kb downstream 10.0kb downstream 13436 true Chr03: 49984952-49998387 Phaseolus vulgaris
Phvul.003G260500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 49984952-49994951 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296291 5265 Fabidae View MSA
124041945 5270 Rosid View MSA
123743841 5271 Pentapetalae View MSA
122796750 5272 Eudicot View MSA
122051975 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.287481 0.0 1.12849 Low  
cufflinks 0.154734 0.0 0.637349 Low Low
cufflinks 0.200869 0.0 0.808681 Low Low
cufflinks 0.23771 0.0 0.953024 Low  
cufflinks 1.45442 0.0 4.97428   High
cufflinks 1.20949 0.0 4.17646    
cufflinks 1.07845 0.0 3.76236    
cufflinks 0.27834 0.0 1.0898 Low  
cufflinks 0.998836 0.0 3.5134    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.51023 0.0 5.12174   High

0 Strain