Gene : Phvul.003G261000 P. vulgaris v2.1
Defline:  (1 of 4) K02938 - large subunit ribosomal protein L8e (RP-L8e, RPL8) Genomic Order:  2657
Name:  ? Phvul.003G261000 Secondary Identifier:  ? PAC:37144863
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G261000 0.5kb upstream 0.5kb upstream 1984 true Chr03: 50052396-50054379 Phaseolus vulgaris
Phvul.003G261000 0.5kb upstream 0.5kb upstream 500 false Chr03: 50053880-50054379 Phaseolus vulgaris
Phvul.003G261000 0.5kb downstream 0.5kb downstream 1984 true Chr03: 50051896-50053879 Phaseolus vulgaris
Phvul.003G261000 0.5kb downstream 0.5kb downstream 500 false Chr03: 50051896-50052395 Phaseolus vulgaris
Phvul.003G261000 1.0kb upstream 1.0kb upstream 2484 true Chr03: 50052396-50054879 Phaseolus vulgaris
Phvul.003G261000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50053880-50054879 Phaseolus vulgaris
Phvul.003G261000 1.0kb downstream 1.0kb downstream 2484 true Chr03: 50051396-50053879 Phaseolus vulgaris
Phvul.003G261000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50051396-50052395 Phaseolus vulgaris
Phvul.003G261000 2.0kb upstream 2.0kb upstream 3484 true Chr03: 50052396-50055879 Phaseolus vulgaris
Phvul.003G261000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50053880-50055879 Phaseolus vulgaris
Phvul.003G261000 2.0kb downstream 2.0kb downstream 3484 true Chr03: 50050396-50053879 Phaseolus vulgaris
Phvul.003G261000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50050396-50052395 Phaseolus vulgaris
Phvul.003G261000 5.0kb upstream 5.0kb upstream 6484 true Chr03: 50052396-50058879 Phaseolus vulgaris
Phvul.003G261000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50053880-50058879 Phaseolus vulgaris
Phvul.003G261000 5.0kb downstream 5.0kb downstream 6484 true Chr03: 50047396-50053879 Phaseolus vulgaris
Phvul.003G261000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50047396-50052395 Phaseolus vulgaris
Phvul.003G261000 10.0kb upstream 10.0kb upstream 11484 true Chr03: 50052396-50063879 Phaseolus vulgaris
Phvul.003G261000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50053880-50063879 Phaseolus vulgaris
Phvul.003G261000 10.0kb downstream 10.0kb downstream 11484 true Chr03: 50042396-50053879 Phaseolus vulgaris
Phvul.003G261000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50042396-50052395 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312970 5265 Fabidae View MSA
124067986 5270 Rosid View MSA
123745881 5271 Pentapetalae View MSA
122789259 5272 Eudicot View MSA
122042559 5273 Angiosperm View MSA
121350897 5274 Embryophyte View MSA
123424033 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 106.939 0.0 287.004 High  
cufflinks 187.18 0.0 533.504 High High
cufflinks 76.9538 0.0 202.132 High Low
cufflinks 174.779 0.0 494.371 High High
cufflinks 159.411 0.0 446.668 High  
cufflinks 103.534 0.0 277.888 High  
cufflinks 105.574 0.0 283.992 High  
cufflinks 110.283 0.0 296.7 High  
cufflinks 160.081 0.0 448.615 High  
cufflinks 71.46 0.0 187.183 High Low
cufflinks 150.798 0.0 420.279 High  

0 Strain