Gene : Phvul.003G260800 P. vulgaris v2.1
Defline:  (1 of 1) K09578 - peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 (PIN1) Genomic Order:  2655
Name:  ? Phvul.003G260800 Secondary Identifier:  ? PAC:37147361
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G260800 0.5kb upstream 0.5kb upstream 3799 true Chr03: 50038611-50042409 Phaseolus vulgaris
Phvul.003G260800 0.5kb upstream 0.5kb upstream 500 false Chr03: 50038611-50039110 Phaseolus vulgaris
Phvul.003G260800 0.5kb downstream 0.5kb downstream 3799 true Chr03: 50039111-50042909 Phaseolus vulgaris
Phvul.003G260800 0.5kb downstream 0.5kb downstream 500 false Chr03: 50042410-50042909 Phaseolus vulgaris
Phvul.003G260800 1.0kb upstream 1.0kb upstream 4299 true Chr03: 50038111-50042409 Phaseolus vulgaris
Phvul.003G260800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 50038111-50039110 Phaseolus vulgaris
Phvul.003G260800 1.0kb downstream 1.0kb downstream 4299 true Chr03: 50039111-50043409 Phaseolus vulgaris
Phvul.003G260800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 50042410-50043409 Phaseolus vulgaris
Phvul.003G260800 2.0kb upstream 2.0kb upstream 5299 true Chr03: 50037111-50042409 Phaseolus vulgaris
Phvul.003G260800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 50037111-50039110 Phaseolus vulgaris
Phvul.003G260800 2.0kb downstream 2.0kb downstream 5299 true Chr03: 50039111-50044409 Phaseolus vulgaris
Phvul.003G260800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 50042410-50044409 Phaseolus vulgaris
Phvul.003G260800 5.0kb upstream 5.0kb upstream 8299 true Chr03: 50034111-50042409 Phaseolus vulgaris
Phvul.003G260800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 50034111-50039110 Phaseolus vulgaris
Phvul.003G260800 5.0kb downstream 5.0kb downstream 8299 true Chr03: 50039111-50047409 Phaseolus vulgaris
Phvul.003G260800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 50042410-50047409 Phaseolus vulgaris
Phvul.003G260800 10.0kb upstream 10.0kb upstream 13299 true Chr03: 50029111-50042409 Phaseolus vulgaris
Phvul.003G260800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 50029111-50039110 Phaseolus vulgaris
Phvul.003G260800 10.0kb downstream 10.0kb downstream 13299 true Chr03: 50039111-50052409 Phaseolus vulgaris
Phvul.003G260800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 50042410-50052409 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305373 5265 Fabidae View MSA
124061766 5270 Rosid View MSA
123750072 5271 Pentapetalae View MSA
122789506 5272 Eudicot View MSA
122046490 5273 Angiosperm View MSA
123429014 5275 Viridiplantae View MSA
121345205 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 151.544 0.0 408.22 High High
cufflinks 106.353 0.0 280.016 High  
cufflinks 84.6139 0.0 219.852 High  
cufflinks 182.679 0.0 501.872 High High
cufflinks 134.662 0.0 359.27 High  
cufflinks 58.3544 0.0 150.836 High Low
cufflinks 89.5365 0.0 234.161 High  
cufflinks 77.2131 0.0 200.45 High  
cufflinks 99.9656 0.0 262.941 High  
cufflinks 81.5224 0.0 212.011 High  
cufflinks 153.568 0.0 416.678 High High

0 Strain