Gene : Phvul.003G248400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR16057 - WINS1, 2 PROTEIN Genomic Order:  2529
Name:  ? Phvul.003G248400 Secondary Identifier:  ? PAC:37147735
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G248400 0.5kb upstream 0.5kb upstream 9642 true Chr03: 48573208-48582849 Phaseolus vulgaris
Phvul.003G248400 0.5kb upstream 0.5kb upstream 500 false Chr03: 48582350-48582849 Phaseolus vulgaris
Phvul.003G248400 0.5kb downstream 0.5kb downstream 9642 true Chr03: 48572708-48582349 Phaseolus vulgaris
Phvul.003G248400 0.5kb downstream 0.5kb downstream 500 false Chr03: 48572708-48573207 Phaseolus vulgaris
Phvul.003G248400 1.0kb upstream 1.0kb upstream 10142 true Chr03: 48573208-48583349 Phaseolus vulgaris
Phvul.003G248400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 48582350-48583349 Phaseolus vulgaris
Phvul.003G248400 1.0kb downstream 1.0kb downstream 10142 true Chr03: 48572208-48582349 Phaseolus vulgaris
Phvul.003G248400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 48572208-48573207 Phaseolus vulgaris
Phvul.003G248400 2.0kb upstream 2.0kb upstream 11142 true Chr03: 48573208-48584349 Phaseolus vulgaris
Phvul.003G248400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 48582350-48584349 Phaseolus vulgaris
Phvul.003G248400 2.0kb downstream 2.0kb downstream 11142 true Chr03: 48571208-48582349 Phaseolus vulgaris
Phvul.003G248400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 48571208-48573207 Phaseolus vulgaris
Phvul.003G248400 5.0kb upstream 5.0kb upstream 14142 true Chr03: 48573208-48587349 Phaseolus vulgaris
Phvul.003G248400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 48582350-48587349 Phaseolus vulgaris
Phvul.003G248400 5.0kb downstream 5.0kb downstream 14142 true Chr03: 48568208-48582349 Phaseolus vulgaris
Phvul.003G248400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 48568208-48573207 Phaseolus vulgaris
Phvul.003G248400 10.0kb upstream 10.0kb upstream 19142 true Chr03: 48573208-48592349 Phaseolus vulgaris
Phvul.003G248400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 48582350-48592349 Phaseolus vulgaris
Phvul.003G248400 10.0kb downstream 10.0kb downstream 19142 true Chr03: 48563208-48582349 Phaseolus vulgaris
Phvul.003G248400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 48563208-48573207 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302945 5265 Fabidae View MSA
124050314 5270 Rosid View MSA
123738250 5271 Pentapetalae View MSA
122793539 5272 Eudicot View MSA
122042842 5273 Angiosperm View MSA
121348888 5274 Embryophyte View MSA
123381062 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.607864 0.0 3.25743   Low
cufflinks 0.814093 0.0 4.16703    
cufflinks 1.87767 0.0 7.33257   High
cufflinks 0.65102 0.0 3.39573   Low
cufflinks 1.37615 0.0 4.73776    
cufflinks 1.41272 0.0 7.10445    
cufflinks 1.55991 0.0 6.52068    
cufflinks 1.9066 0.0 8.70488   High
cufflinks 1.28548 0.0 5.65058    
cufflinks 1.7192 0.0 8.22686    
cufflinks 1.02205 0.0 4.70904    

0 Strain