Gene : Phvul.003G252100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR21495//PTHR21495:SF70 - NUCLEOPORIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2568
Name:  ? Phvul.003G252100 Secondary Identifier:  ? PAC:37147555
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G252100 0.5kb upstream 0.5kb upstream 1341 true Chr03: 49124434-49125774 Phaseolus vulgaris
Phvul.003G252100 0.5kb upstream 0.5kb upstream 500 false Chr03: 49124434-49124933 Phaseolus vulgaris
Phvul.003G252100 0.5kb downstream 0.5kb downstream 1341 true Chr03: 49124934-49126274 Phaseolus vulgaris
Phvul.003G252100 0.5kb downstream 0.5kb downstream 500 false Chr03: 49125775-49126274 Phaseolus vulgaris
Phvul.003G252100 1.0kb upstream 1.0kb upstream 1841 true Chr03: 49123934-49125774 Phaseolus vulgaris
Phvul.003G252100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 49123934-49124933 Phaseolus vulgaris
Phvul.003G252100 1.0kb downstream 1.0kb downstream 1841 true Chr03: 49124934-49126774 Phaseolus vulgaris
Phvul.003G252100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 49125775-49126774 Phaseolus vulgaris
Phvul.003G252100 2.0kb upstream 2.0kb upstream 2841 true Chr03: 49122934-49125774 Phaseolus vulgaris
Phvul.003G252100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 49122934-49124933 Phaseolus vulgaris
Phvul.003G252100 2.0kb downstream 2.0kb downstream 2841 true Chr03: 49124934-49127774 Phaseolus vulgaris
Phvul.003G252100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 49125775-49127774 Phaseolus vulgaris
Phvul.003G252100 5.0kb upstream 5.0kb upstream 5841 true Chr03: 49119934-49125774 Phaseolus vulgaris
Phvul.003G252100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 49119934-49124933 Phaseolus vulgaris
Phvul.003G252100 5.0kb downstream 5.0kb downstream 5841 true Chr03: 49124934-49130774 Phaseolus vulgaris
Phvul.003G252100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 49125775-49130774 Phaseolus vulgaris
Phvul.003G252100 10.0kb upstream 10.0kb upstream 10841 true Chr03: 49114934-49125774 Phaseolus vulgaris
Phvul.003G252100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 49114934-49124933 Phaseolus vulgaris
Phvul.003G252100 10.0kb downstream 10.0kb downstream 10841 true Chr03: 49124934-49135774 Phaseolus vulgaris
Phvul.003G252100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 49125775-49135774 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310154 5265 Fabidae View MSA
124071595 5270 Rosid View MSA
123748971 5271 Pentapetalae View MSA
122793994 5272 Eudicot View MSA
122050560 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.27871 0.0 7.9635    
cufflinks 29.2505 0.0 78.0262    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.165177 0.0 0.716281 Low  
cufflinks 0.0818607 0.0 0.384382 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 31.2625 0.0 83.1504    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain