Gene : Phvul.003G249600 P. vulgaris v2.1
Defline:  (1 of 21) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  2541
Name:  ? Phvul.003G249600 Secondary Identifier:  ? PAC:37145690
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G249600 0.5kb upstream 0.5kb upstream 3854 true Chr03: 48726140-48729993 Phaseolus vulgaris
Phvul.003G249600 0.5kb upstream 0.5kb upstream 500 false Chr03: 48726140-48726639 Phaseolus vulgaris
Phvul.003G249600 0.5kb downstream 0.5kb downstream 3854 true Chr03: 48726640-48730493 Phaseolus vulgaris
Phvul.003G249600 0.5kb downstream 0.5kb downstream 500 false Chr03: 48729994-48730493 Phaseolus vulgaris
Phvul.003G249600 1.0kb upstream 1.0kb upstream 4354 true Chr03: 48725640-48729993 Phaseolus vulgaris
Phvul.003G249600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 48725640-48726639 Phaseolus vulgaris
Phvul.003G249600 1.0kb downstream 1.0kb downstream 4354 true Chr03: 48726640-48730993 Phaseolus vulgaris
Phvul.003G249600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 48729994-48730993 Phaseolus vulgaris
Phvul.003G249600 2.0kb upstream 2.0kb upstream 5354 true Chr03: 48724640-48729993 Phaseolus vulgaris
Phvul.003G249600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 48724640-48726639 Phaseolus vulgaris
Phvul.003G249600 2.0kb downstream 2.0kb downstream 5354 true Chr03: 48726640-48731993 Phaseolus vulgaris
Phvul.003G249600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 48729994-48731993 Phaseolus vulgaris
Phvul.003G249600 5.0kb upstream 5.0kb upstream 8354 true Chr03: 48721640-48729993 Phaseolus vulgaris
Phvul.003G249600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 48721640-48726639 Phaseolus vulgaris
Phvul.003G249600 5.0kb downstream 5.0kb downstream 8354 true Chr03: 48726640-48734993 Phaseolus vulgaris
Phvul.003G249600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 48729994-48734993 Phaseolus vulgaris
Phvul.003G249600 10.0kb upstream 10.0kb upstream 13354 true Chr03: 48716640-48729993 Phaseolus vulgaris
Phvul.003G249600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 48716640-48726639 Phaseolus vulgaris
Phvul.003G249600 10.0kb downstream 10.0kb downstream 13354 true Chr03: 48726640-48739993 Phaseolus vulgaris
Phvul.003G249600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 48729994-48739993 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302287 5265 Fabidae View MSA
124062136 5270 Rosid View MSA
123740597 5271 Pentapetalae View MSA
122793166 5272 Eudicot View MSA
122048903 5273 Angiosperm View MSA
121311163 5274 Embryophyte View MSA
123348497 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.64034 0.0 22.3009   Low
cufflinks 18.925 0.0 58.9223    
cufflinks 20.6618 0.0 65.3211    
cufflinks 14.0344 0.0 43.9515    
cufflinks 21.2606 0.0 67.2718    
cufflinks 32.1834 0.0 105.909   High
cufflinks 16.6623 0.0 52.1208    
cufflinks 19.034 0.0 59.5212    
cufflinks 14.3116 0.0 44.8737    
cufflinks 7.24787 0.0 23.9997   Low
cufflinks 25.7337 0.0 82.8257    

0 Strain