Gene : Phvul.003G249200 P. vulgaris v2.1
Genomic Order:  2537 Name:  ? Phvul.003G249200
Secondary Identifier:  ? PAC:37147597
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G249200 0.5kb upstream 0.5kb upstream 1846 true Chr03: 48702105-48703950 Phaseolus vulgaris
Phvul.003G249200 0.5kb upstream 0.5kb upstream 500 false Chr03: 48702105-48702604 Phaseolus vulgaris
Phvul.003G249200 0.5kb downstream 0.5kb downstream 1846 true Chr03: 48702605-48704450 Phaseolus vulgaris
Phvul.003G249200 0.5kb downstream 0.5kb downstream 500 false Chr03: 48703951-48704450 Phaseolus vulgaris
Phvul.003G249200 1.0kb upstream 1.0kb upstream 2346 true Chr03: 48701605-48703950 Phaseolus vulgaris
Phvul.003G249200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 48701605-48702604 Phaseolus vulgaris
Phvul.003G249200 1.0kb downstream 1.0kb downstream 2346 true Chr03: 48702605-48704950 Phaseolus vulgaris
Phvul.003G249200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 48703951-48704950 Phaseolus vulgaris
Phvul.003G249200 2.0kb upstream 2.0kb upstream 3346 true Chr03: 48700605-48703950 Phaseolus vulgaris
Phvul.003G249200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 48700605-48702604 Phaseolus vulgaris
Phvul.003G249200 2.0kb downstream 2.0kb downstream 3346 true Chr03: 48702605-48705950 Phaseolus vulgaris
Phvul.003G249200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 48703951-48705950 Phaseolus vulgaris
Phvul.003G249200 5.0kb upstream 5.0kb upstream 6346 true Chr03: 48697605-48703950 Phaseolus vulgaris
Phvul.003G249200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 48697605-48702604 Phaseolus vulgaris
Phvul.003G249200 5.0kb downstream 5.0kb downstream 6346 true Chr03: 48702605-48708950 Phaseolus vulgaris
Phvul.003G249200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 48703951-48708950 Phaseolus vulgaris
Phvul.003G249200 10.0kb upstream 10.0kb upstream 11346 true Chr03: 48692605-48703950 Phaseolus vulgaris
Phvul.003G249200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 48692605-48702604 Phaseolus vulgaris
Phvul.003G249200 10.0kb downstream 10.0kb downstream 11346 true Chr03: 48702605-48713950 Phaseolus vulgaris
Phvul.003G249200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 48703951-48713950 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254964 5265 Fabidae View MSA
124074268 5270 Rosid View MSA
123750912 5271 Pentapetalae View MSA
122773870 5272 Eudicot View MSA
122050184 5273 Angiosperm View MSA
121311784 5274 Embryophyte View MSA
123349033 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.593707 0.0 2.29042   Low
cufflinks 1.79247 0.0 6.26839    
cufflinks 1.82401 0.0 6.36198    
cufflinks 0.924706 0.0 3.43666    
cufflinks 3.92938 0.0 12.67   High
cufflinks 0.750521 0.0 2.83812    
cufflinks 1.65054 0.0 5.78791    
cufflinks 1.07703 0.0 3.92561    
cufflinks 0.409573 0.0 1.62086 Low Low
cufflinks 2.66387 0.0 8.93855    
cufflinks 10.0371 0.0 28.9693   High

0 Strain