Gene : Phvul.004G068600 P. vulgaris v2.1
Defline:  (1 of 36) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  719
Name:  ? Phvul.004G068600 Secondary Identifier:  ? PAC:37162825
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G068600 0.5kb upstream 0.5kb upstream 7362 true Chr04: 10628586-10635947 Phaseolus vulgaris
Phvul.004G068600 0.5kb upstream 0.5kb upstream 500 false Chr04: 10635448-10635947 Phaseolus vulgaris
Phvul.004G068600 0.5kb downstream 0.5kb downstream 7362 true Chr04: 10628086-10635447 Phaseolus vulgaris
Phvul.004G068600 0.5kb downstream 0.5kb downstream 500 false Chr04: 10628086-10628585 Phaseolus vulgaris
Phvul.004G068600 1.0kb upstream 1.0kb upstream 7862 true Chr04: 10628586-10636447 Phaseolus vulgaris
Phvul.004G068600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 10635448-10636447 Phaseolus vulgaris
Phvul.004G068600 1.0kb downstream 1.0kb downstream 7862 true Chr04: 10627586-10635447 Phaseolus vulgaris
Phvul.004G068600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 10627586-10628585 Phaseolus vulgaris
Phvul.004G068600 2.0kb upstream 2.0kb upstream 8862 true Chr04: 10628586-10637447 Phaseolus vulgaris
Phvul.004G068600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 10635448-10637447 Phaseolus vulgaris
Phvul.004G068600 2.0kb downstream 2.0kb downstream 8862 true Chr04: 10626586-10635447 Phaseolus vulgaris
Phvul.004G068600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 10626586-10628585 Phaseolus vulgaris
Phvul.004G068600 5.0kb upstream 5.0kb upstream 11862 true Chr04: 10628586-10640447 Phaseolus vulgaris
Phvul.004G068600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 10635448-10640447 Phaseolus vulgaris
Phvul.004G068600 5.0kb downstream 5.0kb downstream 11862 true Chr04: 10623586-10635447 Phaseolus vulgaris
Phvul.004G068600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 10623586-10628585 Phaseolus vulgaris
Phvul.004G068600 10.0kb upstream 10.0kb upstream 16862 true Chr04: 10628586-10645447 Phaseolus vulgaris
Phvul.004G068600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 10635448-10645447 Phaseolus vulgaris
Phvul.004G068600 10.0kb downstream 10.0kb downstream 16862 true Chr04: 10618586-10635447 Phaseolus vulgaris
Phvul.004G068600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 10618586-10628585 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310383 5265 Fabidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.14503 0.0 0.59399 Low Low
cufflinks 0.617986 0.0 2.25827    
cufflinks 0.788276 0.0 2.8076    
cufflinks 0.470776 0.0 1.76139 Low  
cufflinks 2.83902 0.0 8.83868   High
cufflinks 0.727735 0.0 2.61557    
cufflinks 1.6117 0.0 5.30065    
cufflinks 0.422545 0.0 1.58881 Low  
cufflinks 1.4341 0.0 4.77618    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.45423 0.0 7.76091   High

0 Strain