Gene : Phvul.004G069100 P. vulgaris v2.1
Defline:  (1 of 2) K02978 - small subunit ribosomal protein S27e (RP-S27e, RPS27) Genomic Order:  724
Name:  ? Phvul.004G069100 Secondary Identifier:  ? PAC:37162953
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G069100 0.5kb upstream 0.5kb upstream 1644 true Chr04: 10794871-10796514 Phaseolus vulgaris
Phvul.004G069100 0.5kb upstream 0.5kb upstream 500 false Chr04: 10796015-10796514 Phaseolus vulgaris
Phvul.004G069100 0.5kb downstream 0.5kb downstream 1644 true Chr04: 10794371-10796014 Phaseolus vulgaris
Phvul.004G069100 0.5kb downstream 0.5kb downstream 500 false Chr04: 10794371-10794870 Phaseolus vulgaris
Phvul.004G069100 1.0kb upstream 1.0kb upstream 2144 true Chr04: 10794871-10797014 Phaseolus vulgaris
Phvul.004G069100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 10796015-10797014 Phaseolus vulgaris
Phvul.004G069100 1.0kb downstream 1.0kb downstream 2144 true Chr04: 10793871-10796014 Phaseolus vulgaris
Phvul.004G069100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 10793871-10794870 Phaseolus vulgaris
Phvul.004G069100 2.0kb upstream 2.0kb upstream 3144 true Chr04: 10794871-10798014 Phaseolus vulgaris
Phvul.004G069100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 10796015-10798014 Phaseolus vulgaris
Phvul.004G069100 2.0kb downstream 2.0kb downstream 3144 true Chr04: 10792871-10796014 Phaseolus vulgaris
Phvul.004G069100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 10792871-10794870 Phaseolus vulgaris
Phvul.004G069100 5.0kb upstream 5.0kb upstream 6144 true Chr04: 10794871-10801014 Phaseolus vulgaris
Phvul.004G069100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 10796015-10801014 Phaseolus vulgaris
Phvul.004G069100 5.0kb downstream 5.0kb downstream 6144 true Chr04: 10789871-10796014 Phaseolus vulgaris
Phvul.004G069100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 10789871-10794870 Phaseolus vulgaris
Phvul.004G069100 10.0kb upstream 10.0kb upstream 11144 true Chr04: 10794871-10806014 Phaseolus vulgaris
Phvul.004G069100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 10796015-10806014 Phaseolus vulgaris
Phvul.004G069100 10.0kb downstream 10.0kb downstream 11144 true Chr04: 10784871-10796014 Phaseolus vulgaris
Phvul.004G069100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 10784871-10794870 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041078 5273 Angiosperm View MSA
122314519 5265 Fabidae View MSA
124065866 5270 Rosid View MSA
123752077 5271 Pentapetalae View MSA
122796838 5272 Eudicot View MSA
121348120 5274 Embryophyte View MSA
123423805 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 165.948 0.0 437.24 High  
cufflinks 266.667 0.0 730.299 High  
cufflinks 126.128 0.0 328.177 High Low
cufflinks 305.924 0.0 847.599 High High
cufflinks 240.121 0.0 646.246 High  
cufflinks 163.676 0.0 431.305 High  
cufflinks 215.009 0.0 578.463 High  
cufflinks 297.16 0.0 823.945 High High
cufflinks 245.943 0.0 668.253 High  
cufflinks 143.553 0.0 374.518 High Low
cufflinks 238.821 0.0 644.947 High  

0 Strain