Gene : Phvul.007G016600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31618:SF1 - MECHANOSENSITIVE ION CHANNEL PROTEIN 6-RELATED Genomic Order:  163
Name:  ? Phvul.007G016600 Secondary Identifier:  ? PAC:37164024
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G016600 0.5kb upstream 0.5kb upstream 4601 true Chr07: 1140470-1145070 Phaseolus vulgaris
Phvul.007G016600 0.5kb upstream 0.5kb upstream 500 false Chr07: 1140470-1140969 Phaseolus vulgaris
Phvul.007G016600 0.5kb downstream 0.5kb downstream 4601 true Chr07: 1140970-1145570 Phaseolus vulgaris
Phvul.007G016600 0.5kb downstream 0.5kb downstream 500 false Chr07: 1145071-1145570 Phaseolus vulgaris
Phvul.007G016600 1.0kb upstream 1.0kb upstream 5101 true Chr07: 1139970-1145070 Phaseolus vulgaris
Phvul.007G016600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1139970-1140969 Phaseolus vulgaris
Phvul.007G016600 1.0kb downstream 1.0kb downstream 5101 true Chr07: 1140970-1146070 Phaseolus vulgaris
Phvul.007G016600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1145071-1146070 Phaseolus vulgaris
Phvul.007G016600 2.0kb upstream 2.0kb upstream 6101 true Chr07: 1138970-1145070 Phaseolus vulgaris
Phvul.007G016600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1138970-1140969 Phaseolus vulgaris
Phvul.007G016600 2.0kb downstream 2.0kb downstream 6101 true Chr07: 1140970-1147070 Phaseolus vulgaris
Phvul.007G016600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1145071-1147070 Phaseolus vulgaris
Phvul.007G016600 5.0kb upstream 5.0kb upstream 9101 true Chr07: 1135970-1145070 Phaseolus vulgaris
Phvul.007G016600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1135970-1140969 Phaseolus vulgaris
Phvul.007G016600 5.0kb downstream 5.0kb downstream 9101 true Chr07: 1140970-1150070 Phaseolus vulgaris
Phvul.007G016600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1145071-1150070 Phaseolus vulgaris
Phvul.007G016600 10.0kb upstream 10.0kb upstream 14101 true Chr07: 1130970-1145070 Phaseolus vulgaris
Phvul.007G016600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1130970-1140969 Phaseolus vulgaris
Phvul.007G016600 10.0kb downstream 10.0kb downstream 14101 true Chr07: 1140970-1155070 Phaseolus vulgaris
Phvul.007G016600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1145071-1155070 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300423 5265 Fabidae View MSA
124068168 5270 Rosid View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.49124 0.0 7.06663    
cufflinks 4.97531 0.0 13.3157   High
cufflinks 0.464851 0.0 1.59719 Low  
cufflinks 1.51657 0.0 4.56481    
cufflinks 2.10936 0.0 6.08984    
cufflinks 0.218635 0.0 0.807198 Low Low
cufflinks 0.355948 0.0 1.24819 Low  
cufflinks 0.151444 0.0 0.575377 Low Low
cufflinks 1.25812 0.0 3.84039    
cufflinks 8.40675 0.0 21.8479   High
cufflinks 0.729641 0.0 2.37595    

0 Strain