Gene : Phvul.007G017000 P. vulgaris v2.1
Defline:  (1 of 1) K06640 - serine/threonine-protein kinase ATR (ATR) Genomic Order:  167
Name:  ? Phvul.007G017000 Secondary Identifier:  ? PAC:37166095
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G017000 0.5kb upstream 0.5kb upstream 9459 true Chr07: 1151231-1160689 Phaseolus vulgaris
Phvul.007G017000 0.5kb upstream 0.5kb upstream 500 false Chr07: 1151231-1151730 Phaseolus vulgaris
Phvul.007G017000 0.5kb downstream 0.5kb downstream 9459 true Chr07: 1151731-1161189 Phaseolus vulgaris
Phvul.007G017000 0.5kb downstream 0.5kb downstream 500 false Chr07: 1160690-1161189 Phaseolus vulgaris
Phvul.007G017000 1.0kb upstream 1.0kb upstream 9959 true Chr07: 1150731-1160689 Phaseolus vulgaris
Phvul.007G017000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1150731-1151730 Phaseolus vulgaris
Phvul.007G017000 1.0kb downstream 1.0kb downstream 9959 true Chr07: 1151731-1161689 Phaseolus vulgaris
Phvul.007G017000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1160690-1161689 Phaseolus vulgaris
Phvul.007G017000 2.0kb upstream 2.0kb upstream 10959 true Chr07: 1149731-1160689 Phaseolus vulgaris
Phvul.007G017000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1149731-1151730 Phaseolus vulgaris
Phvul.007G017000 2.0kb downstream 2.0kb downstream 10959 true Chr07: 1151731-1162689 Phaseolus vulgaris
Phvul.007G017000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1160690-1162689 Phaseolus vulgaris
Phvul.007G017000 5.0kb upstream 5.0kb upstream 13959 true Chr07: 1146731-1160689 Phaseolus vulgaris
Phvul.007G017000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1146731-1151730 Phaseolus vulgaris
Phvul.007G017000 5.0kb downstream 5.0kb downstream 13959 true Chr07: 1151731-1165689 Phaseolus vulgaris
Phvul.007G017000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1160690-1165689 Phaseolus vulgaris
Phvul.007G017000 10.0kb upstream 10.0kb upstream 18959 true Chr07: 1141731-1160689 Phaseolus vulgaris
Phvul.007G017000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1141731-1151730 Phaseolus vulgaris
Phvul.007G017000 10.0kb downstream 10.0kb downstream 18959 true Chr07: 1151731-1170689 Phaseolus vulgaris
Phvul.007G017000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1160690-1170689 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310338 5265 Fabidae View MSA
124068792 5270 Rosid View MSA
123737663 5271 Pentapetalae View MSA
122786169 5272 Eudicot View MSA
122044590 5273 Angiosperm View MSA
121345058 5274 Embryophyte View MSA
123426906 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.289318 0.0 4.53786 Low Low
cufflinks 1.71157 0.0 55.9376    
cufflinks 1.11151 0.0 790.91    
cufflinks 0.285632 0.0 16.93 Low Low
cufflinks 1.74117 0.0 17.2915    
cufflinks 2.19997 0.0 255.642    
cufflinks 2.23502 0.0 8.84308    
cufflinks 1.47381 0.0 5.84363    
cufflinks 1.55348 0.0 8.57556    
cufflinks 0.88833 0.0 29.0531    
cufflinks 1.15517 0.0 20.2484    

0 Strain