Gene : Phvul.007G017400 P. vulgaris v2.1

Defline:  (1 of 1) PTHR20922:SF15 - A_TM021B04.14 PROTEIN Genomic Order:  171
Name:  ? Phvul.007G017400 Secondary Identifier:  ? PAC:37165985

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G017400 0.5kb upstream 0.5kb upstream 2903 true Chr07: 1174761-1177663 Phaseolus vulgaris
Phvul.007G017400 0.5kb upstream 0.5kb upstream 500 false Chr07: 1174761-1175260 Phaseolus vulgaris
Phvul.007G017400 0.5kb downstream 0.5kb downstream 2903 true Chr07: 1175261-1178163 Phaseolus vulgaris
Phvul.007G017400 0.5kb downstream 0.5kb downstream 500 false Chr07: 1177664-1178163 Phaseolus vulgaris
Phvul.007G017400 1.0kb upstream 1.0kb upstream 3403 true Chr07: 1174261-1177663 Phaseolus vulgaris
Phvul.007G017400 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1174261-1175260 Phaseolus vulgaris
Phvul.007G017400 1.0kb downstream 1.0kb downstream 3403 true Chr07: 1175261-1178663 Phaseolus vulgaris
Phvul.007G017400 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1177664-1178663 Phaseolus vulgaris
Phvul.007G017400 2.0kb upstream 2.0kb upstream 4403 true Chr07: 1173261-1177663 Phaseolus vulgaris
Phvul.007G017400 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1173261-1175260 Phaseolus vulgaris
Phvul.007G017400 2.0kb downstream 2.0kb downstream 4403 true Chr07: 1175261-1179663 Phaseolus vulgaris
Phvul.007G017400 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1177664-1179663 Phaseolus vulgaris
Phvul.007G017400 5.0kb upstream 5.0kb upstream 7403 true Chr07: 1170261-1177663 Phaseolus vulgaris
Phvul.007G017400 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1170261-1175260 Phaseolus vulgaris
Phvul.007G017400 5.0kb downstream 5.0kb downstream 7403 true Chr07: 1175261-1182663 Phaseolus vulgaris
Phvul.007G017400 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1177664-1182663 Phaseolus vulgaris
Phvul.007G017400 10.0kb upstream 10.0kb upstream 12403 true Chr07: 1165261-1177663 Phaseolus vulgaris
Phvul.007G017400 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1165261-1175260 Phaseolus vulgaris
Phvul.007G017400 10.0kb downstream 10.0kb downstream 12403 true Chr07: 1175261-1187663 Phaseolus vulgaris
Phvul.007G017400 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1177664-1187663 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306935 5265 Fabidae View MSA
124065926 5270 Rosid View MSA
123752849 5271 Pentapetalae View MSA
122787585 5272 Eudicot View MSA
122042389 5273 Angiosperm View MSA
121347257 5274 Embryophyte View MSA
123425918 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 109.023 0.0 291.695 High High
cufflinks 20.9687 0.0 56.0925    
cufflinks 136.871 0.0 371.662 High High
cufflinks 23.7748 0.0 63.0051    
cufflinks 31.4721 0.0 82.2677    
cufflinks 32.3126 0.0 84.1753    
cufflinks 16.6594 0.0 45.4417    
cufflinks 12.1339 0.0 34.0938   Low
cufflinks 16.4559 0.0 44.9588    
cufflinks 39.3687 0.0 102.045 High  
cufflinks 24.9306 0.0 66.0512    

0 Strain