Gene : Phvul.004G069900 P. vulgaris v2.1
Defline:  (1 of 180) PF00847 - AP2 domain (AP2) Genomic Order:  732
Name:  ? Phvul.004G069900 Secondary Identifier:  ? PAC:37161961
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G069900 0.5kb upstream 0.5kb upstream 2684 true Chr04: 10968974-10971657 Phaseolus vulgaris
Phvul.004G069900 0.5kb upstream 0.5kb upstream 500 false Chr04: 10968974-10969473 Phaseolus vulgaris
Phvul.004G069900 0.5kb downstream 0.5kb downstream 2684 true Chr04: 10969474-10972157 Phaseolus vulgaris
Phvul.004G069900 0.5kb downstream 0.5kb downstream 500 false Chr04: 10971658-10972157 Phaseolus vulgaris
Phvul.004G069900 1.0kb upstream 1.0kb upstream 3184 true Chr04: 10968474-10971657 Phaseolus vulgaris
Phvul.004G069900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 10968474-10969473 Phaseolus vulgaris
Phvul.004G069900 1.0kb downstream 1.0kb downstream 3184 true Chr04: 10969474-10972657 Phaseolus vulgaris
Phvul.004G069900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 10971658-10972657 Phaseolus vulgaris
Phvul.004G069900 2.0kb upstream 2.0kb upstream 4184 true Chr04: 10967474-10971657 Phaseolus vulgaris
Phvul.004G069900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 10967474-10969473 Phaseolus vulgaris
Phvul.004G069900 2.0kb downstream 2.0kb downstream 4184 true Chr04: 10969474-10973657 Phaseolus vulgaris
Phvul.004G069900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 10971658-10973657 Phaseolus vulgaris
Phvul.004G069900 5.0kb upstream 5.0kb upstream 7184 true Chr04: 10964474-10971657 Phaseolus vulgaris
Phvul.004G069900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 10964474-10969473 Phaseolus vulgaris
Phvul.004G069900 5.0kb downstream 5.0kb downstream 7184 true Chr04: 10969474-10976657 Phaseolus vulgaris
Phvul.004G069900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 10971658-10976657 Phaseolus vulgaris
Phvul.004G069900 10.0kb upstream 10.0kb upstream 12184 true Chr04: 10959474-10971657 Phaseolus vulgaris
Phvul.004G069900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 10959474-10969473 Phaseolus vulgaris
Phvul.004G069900 10.0kb downstream 10.0kb downstream 12184 true Chr04: 10969474-10981657 Phaseolus vulgaris
Phvul.004G069900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 10971658-10981657 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297509 5265 Fabidae View MSA
124073259 5270 Rosid View MSA
123738073 5271 Pentapetalae View MSA
122789741 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.1604 0.0 85.791 High  
cufflinks 6.9316 0.0 19.9492    
cufflinks 3.36529 0.0 10.4792   Low
cufflinks 15.7826 0.0 42.3192    
cufflinks 20.7856 0.0 54.8321    
cufflinks 1.02963 0.0 3.66364   Low
cufflinks 15.173 0.0 40.589    
cufflinks 4.67941 0.0 13.9859    
cufflinks 30.063 0.0 77.8371    
cufflinks 55.8328 0.0 145.182 High High
cufflinks 16.1892 0.0 43.3555    

0 Strain