Gene : Phvul.007G018600 P. vulgaris v2.1
Defline:  (1 of 4) PTHR13789:SF185 - FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN Genomic Order:  183
Name:  ? Phvul.007G018600 Secondary Identifier:  ? PAC:37164874
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G018600 0.5kb upstream 0.5kb upstream 2917 true Chr07: 1291332-1294248 Phaseolus vulgaris
Phvul.007G018600 0.5kb upstream 0.5kb upstream 500 false Chr07: 1291332-1291831 Phaseolus vulgaris
Phvul.007G018600 0.5kb downstream 0.5kb downstream 2917 true Chr07: 1291832-1294748 Phaseolus vulgaris
Phvul.007G018600 0.5kb downstream 0.5kb downstream 500 false Chr07: 1294249-1294748 Phaseolus vulgaris
Phvul.007G018600 1.0kb upstream 1.0kb upstream 3417 true Chr07: 1290832-1294248 Phaseolus vulgaris
Phvul.007G018600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1290832-1291831 Phaseolus vulgaris
Phvul.007G018600 1.0kb downstream 1.0kb downstream 3417 true Chr07: 1291832-1295248 Phaseolus vulgaris
Phvul.007G018600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1294249-1295248 Phaseolus vulgaris
Phvul.007G018600 2.0kb upstream 2.0kb upstream 4417 true Chr07: 1289832-1294248 Phaseolus vulgaris
Phvul.007G018600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1289832-1291831 Phaseolus vulgaris
Phvul.007G018600 2.0kb downstream 2.0kb downstream 4417 true Chr07: 1291832-1296248 Phaseolus vulgaris
Phvul.007G018600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1294249-1296248 Phaseolus vulgaris
Phvul.007G018600 5.0kb upstream 5.0kb upstream 7417 true Chr07: 1286832-1294248 Phaseolus vulgaris
Phvul.007G018600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1286832-1291831 Phaseolus vulgaris
Phvul.007G018600 5.0kb downstream 5.0kb downstream 7417 true Chr07: 1291832-1299248 Phaseolus vulgaris
Phvul.007G018600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1294249-1299248 Phaseolus vulgaris
Phvul.007G018600 10.0kb upstream 10.0kb upstream 12417 true Chr07: 1281832-1294248 Phaseolus vulgaris
Phvul.007G018600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1281832-1291831 Phaseolus vulgaris
Phvul.007G018600 10.0kb downstream 10.0kb downstream 12417 true Chr07: 1291832-1304248 Phaseolus vulgaris
Phvul.007G018600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1294249-1304248 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308429 5265 Fabidae View MSA
124074153 5270 Rosid View MSA
123750629 5271 Pentapetalae View MSA
122796430 5272 Eudicot View MSA
122051519 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121349985 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.20977 0.0 9.7942    
cufflinks 2.03262 0.0 6.51681    
cufflinks 0.2426 0.0 0.95141 Low Low
cufflinks 2.06199 0.0 6.66922    
cufflinks 1.22509 0.0 4.18995    
cufflinks 0.394092 0.0 1.49027 Low  
cufflinks 17.5178 0.0 45.7258   High
cufflinks 4.58658 0.0 13.3516    
cufflinks 53.7991 0.0 141.792 High High
cufflinks 0.152952 0.0 0.624592 Low Low
cufflinks 0.717091 0.0 2.58444    

0 Strain