Gene : Phvul.007G019600 P. vulgaris v2.1
Defline:  (1 of 72) PF02362 - B3 DNA binding domain (B3) Genomic Order:  193
Name:  ? Phvul.007G019600 Secondary Identifier:  ? PAC:37166702
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G019600 0.5kb upstream 0.5kb upstream 1945 true Chr07: 1356288-1358232 Phaseolus vulgaris
Phvul.007G019600 0.5kb upstream 0.5kb upstream 500 false Chr07: 1357733-1358232 Phaseolus vulgaris
Phvul.007G019600 0.5kb downstream 0.5kb downstream 1945 true Chr07: 1355788-1357732 Phaseolus vulgaris
Phvul.007G019600 0.5kb downstream 0.5kb downstream 500 false Chr07: 1355788-1356287 Phaseolus vulgaris
Phvul.007G019600 1.0kb upstream 1.0kb upstream 2445 true Chr07: 1356288-1358732 Phaseolus vulgaris
Phvul.007G019600 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1357733-1358732 Phaseolus vulgaris
Phvul.007G019600 1.0kb downstream 1.0kb downstream 2445 true Chr07: 1355288-1357732 Phaseolus vulgaris
Phvul.007G019600 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1355288-1356287 Phaseolus vulgaris
Phvul.007G019600 2.0kb upstream 2.0kb upstream 3445 true Chr07: 1356288-1359732 Phaseolus vulgaris
Phvul.007G019600 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1357733-1359732 Phaseolus vulgaris
Phvul.007G019600 2.0kb downstream 2.0kb downstream 3445 true Chr07: 1354288-1357732 Phaseolus vulgaris
Phvul.007G019600 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1354288-1356287 Phaseolus vulgaris
Phvul.007G019600 5.0kb upstream 5.0kb upstream 6445 true Chr07: 1356288-1362732 Phaseolus vulgaris
Phvul.007G019600 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1357733-1362732 Phaseolus vulgaris
Phvul.007G019600 5.0kb downstream 5.0kb downstream 6445 true Chr07: 1351288-1357732 Phaseolus vulgaris
Phvul.007G019600 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1351288-1356287 Phaseolus vulgaris
Phvul.007G019600 10.0kb upstream 10.0kb upstream 11445 true Chr07: 1356288-1367732 Phaseolus vulgaris
Phvul.007G019600 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1357733-1367732 Phaseolus vulgaris
Phvul.007G019600 10.0kb downstream 10.0kb downstream 11445 true Chr07: 1346288-1357732 Phaseolus vulgaris
Phvul.007G019600 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1346288-1356287 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315395 5265 Fabidae View MSA
124040562 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.8157 0.0 6.236    
cufflinks 2.3982 0.0 7.97445    
cufflinks 0.683176 0.0 2.56728    
cufflinks 1.19679 0.0 4.32234    
cufflinks 2.46304 0.0 8.24705    
cufflinks 0.257465 0.0 1.04627 Low Low
cufflinks 0.556121 0.0 2.12734 Low  
cufflinks 0.646816 0.0 2.44021    
cufflinks 0.407435 0.0 1.59927 Low Low
cufflinks 3.94589 0.0 12.4274   High
cufflinks 2.34295 0.0 7.8481    

0 Strain