Gene : Phvul.004G071600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13377 - PLACENTAL PROTEIN 6 Genomic Order:  751
Name:  ? Phvul.004G071600 Secondary Identifier:  ? PAC:37162306
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G071600 0.5kb upstream 0.5kb upstream 6362 true Chr04: 11296100-11302461 Phaseolus vulgaris
Phvul.004G071600 0.5kb upstream 0.5kb upstream 500 false Chr04: 11296100-11296599 Phaseolus vulgaris
Phvul.004G071600 0.5kb downstream 0.5kb downstream 6362 true Chr04: 11296600-11302961 Phaseolus vulgaris
Phvul.004G071600 0.5kb downstream 0.5kb downstream 500 false Chr04: 11302462-11302961 Phaseolus vulgaris
Phvul.004G071600 1.0kb upstream 1.0kb upstream 6862 true Chr04: 11295600-11302461 Phaseolus vulgaris
Phvul.004G071600 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11295600-11296599 Phaseolus vulgaris
Phvul.004G071600 1.0kb downstream 1.0kb downstream 6862 true Chr04: 11296600-11303461 Phaseolus vulgaris
Phvul.004G071600 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11302462-11303461 Phaseolus vulgaris
Phvul.004G071600 2.0kb upstream 2.0kb upstream 7862 true Chr04: 11294600-11302461 Phaseolus vulgaris
Phvul.004G071600 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11294600-11296599 Phaseolus vulgaris
Phvul.004G071600 2.0kb downstream 2.0kb downstream 7862 true Chr04: 11296600-11304461 Phaseolus vulgaris
Phvul.004G071600 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11302462-11304461 Phaseolus vulgaris
Phvul.004G071600 5.0kb upstream 5.0kb upstream 10862 true Chr04: 11291600-11302461 Phaseolus vulgaris
Phvul.004G071600 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11291600-11296599 Phaseolus vulgaris
Phvul.004G071600 5.0kb downstream 5.0kb downstream 10862 true Chr04: 11296600-11307461 Phaseolus vulgaris
Phvul.004G071600 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11302462-11307461 Phaseolus vulgaris
Phvul.004G071600 10.0kb upstream 10.0kb upstream 15862 true Chr04: 11286600-11302461 Phaseolus vulgaris
Phvul.004G071600 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11286600-11296599 Phaseolus vulgaris
Phvul.004G071600 10.0kb downstream 10.0kb downstream 15862 true Chr04: 11296600-11312461 Phaseolus vulgaris
Phvul.004G071600 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11302462-11312461 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311918 5265 Fabidae View MSA
124061195 5270 Rosid View MSA
123748664 5271 Pentapetalae View MSA
122792028 5272 Eudicot View MSA
122043069 5273 Angiosperm View MSA
121350097 5274 Embryophyte View MSA
123424498 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.3664 0.0 48.6449    
cufflinks 16.8475 0.0 44.9514    
cufflinks 15.0928 0.0 40.6075    
cufflinks 28.6319 0.0 74.3001   High
cufflinks 18.6236 0.0 49.4889    
cufflinks 12.604 0.0 34.4386   Low
cufflinks 16.9262 0.0 45.2015    
cufflinks 16.394 0.0 43.7889    
cufflinks 18.96 0.0 50.2863    
cufflinks 17.7399 0.0 47.1509    
cufflinks 23.8492 0.0 62.3997   High

0 Strain