Gene : Phvul.007G021200 P. vulgaris v2.1
Defline:  (1 of 1) 4.1.1.33 - Diphosphomevalonate decarboxylase / Mevalonate pyrophosphate decarboxylase Genomic Order:  209
Name:  ? Phvul.007G021200 Secondary Identifier:  ? PAC:37164347
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5910 Phaseolus vulgaris pathologic  
Pvulgaris PWY-922 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G021200 0.5kb upstream 0.5kb upstream 6482 true Chr07: 1498979-1505460 Phaseolus vulgaris
Phvul.007G021200 0.5kb upstream 0.5kb upstream 500 false Chr07: 1498979-1499478 Phaseolus vulgaris
Phvul.007G021200 0.5kb downstream 0.5kb downstream 6482 true Chr07: 1499479-1505960 Phaseolus vulgaris
Phvul.007G021200 0.5kb downstream 0.5kb downstream 500 false Chr07: 1505461-1505960 Phaseolus vulgaris
Phvul.007G021200 1.0kb upstream 1.0kb upstream 6982 true Chr07: 1498479-1505460 Phaseolus vulgaris
Phvul.007G021200 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1498479-1499478 Phaseolus vulgaris
Phvul.007G021200 1.0kb downstream 1.0kb downstream 6982 true Chr07: 1499479-1506460 Phaseolus vulgaris
Phvul.007G021200 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1505461-1506460 Phaseolus vulgaris
Phvul.007G021200 2.0kb upstream 2.0kb upstream 7982 true Chr07: 1497479-1505460 Phaseolus vulgaris
Phvul.007G021200 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1497479-1499478 Phaseolus vulgaris
Phvul.007G021200 2.0kb downstream 2.0kb downstream 7982 true Chr07: 1499479-1507460 Phaseolus vulgaris
Phvul.007G021200 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1505461-1507460 Phaseolus vulgaris
Phvul.007G021200 5.0kb upstream 5.0kb upstream 10982 true Chr07: 1494479-1505460 Phaseolus vulgaris
Phvul.007G021200 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1494479-1499478 Phaseolus vulgaris
Phvul.007G021200 5.0kb downstream 5.0kb downstream 10982 true Chr07: 1499479-1510460 Phaseolus vulgaris
Phvul.007G021200 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1505461-1510460 Phaseolus vulgaris
Phvul.007G021200 10.0kb upstream 10.0kb upstream 15982 true Chr07: 1489479-1505460 Phaseolus vulgaris
Phvul.007G021200 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1489479-1499478 Phaseolus vulgaris
Phvul.007G021200 10.0kb downstream 10.0kb downstream 15982 true Chr07: 1499479-1515460 Phaseolus vulgaris
Phvul.007G021200 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1505461-1515460 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040965 5273 Angiosperm View MSA
122304155 5265 Fabidae View MSA
124066077 5270 Rosid View MSA
123742848 5271 Pentapetalae View MSA
122793764 5272 Eudicot View MSA
121347307 5274 Embryophyte View MSA
123380524 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.1024 0.0 41.7824   Low
cufflinks 35.2706 0.0 92.0598 High  
cufflinks 13.4536 0.0 35.1532   Low
cufflinks 46.8395 0.0 124.039 High High
cufflinks 24.4705 0.0 63.2529    
cufflinks 18.3373 0.0 47.4694    
cufflinks 26.5322 0.0 68.7064    
cufflinks 24.38 0.0 63.0746    
cufflinks 31.0217 0.0 80.5863 High  
cufflinks 22.3097 0.0 57.6684    
cufflinks 31.2847 0.0 81.1685    

0 Strain