Gene : Phvul.004G072000 P. vulgaris v2.1
Defline:  (1 of 3) K10525 - allene oxide cyclase (AOC) Genomic Order:  755
Name:  ? Phvul.004G072000 Secondary Identifier:  ? PAC:37162274
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-735 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.004G072000 0.5kb upstream 0.5kb upstream 2373 true Chr04: 11404087-11406459 Phaseolus vulgaris
Phvul.004G072000 0.5kb upstream 0.5kb upstream 500 false Chr04: 11405960-11406459 Phaseolus vulgaris
Phvul.004G072000 0.5kb downstream 0.5kb downstream 2373 true Chr04: 11403587-11405959 Phaseolus vulgaris
Phvul.004G072000 0.5kb downstream 0.5kb downstream 500 false Chr04: 11403587-11404086 Phaseolus vulgaris
Phvul.004G072000 1.0kb upstream 1.0kb upstream 2873 true Chr04: 11404087-11406959 Phaseolus vulgaris
Phvul.004G072000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11405960-11406959 Phaseolus vulgaris
Phvul.004G072000 1.0kb downstream 1.0kb downstream 2873 true Chr04: 11403087-11405959 Phaseolus vulgaris
Phvul.004G072000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11403087-11404086 Phaseolus vulgaris
Phvul.004G072000 2.0kb upstream 2.0kb upstream 3873 true Chr04: 11404087-11407959 Phaseolus vulgaris
Phvul.004G072000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11405960-11407959 Phaseolus vulgaris
Phvul.004G072000 2.0kb downstream 2.0kb downstream 3873 true Chr04: 11402087-11405959 Phaseolus vulgaris
Phvul.004G072000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11402087-11404086 Phaseolus vulgaris
Phvul.004G072000 5.0kb upstream 5.0kb upstream 6873 true Chr04: 11404087-11410959 Phaseolus vulgaris
Phvul.004G072000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11405960-11410959 Phaseolus vulgaris
Phvul.004G072000 5.0kb downstream 5.0kb downstream 6873 true Chr04: 11399087-11405959 Phaseolus vulgaris
Phvul.004G072000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11399087-11404086 Phaseolus vulgaris
Phvul.004G072000 10.0kb upstream 10.0kb upstream 11873 true Chr04: 11404087-11415959 Phaseolus vulgaris
Phvul.004G072000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11405960-11415959 Phaseolus vulgaris
Phvul.004G072000 10.0kb downstream 10.0kb downstream 11873 true Chr04: 11394087-11405959 Phaseolus vulgaris
Phvul.004G072000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11394087-11404086 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298183 5265 Fabidae View MSA
124066771 5270 Rosid View MSA
123739753 5271 Pentapetalae View MSA
122789032 5272 Eudicot View MSA
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.7151 0.0 92.4777 High  
cufflinks 103.768 0.0 277.769 High High
cufflinks 37.5881 0.0 97.2136    
cufflinks 99.8877 0.0 267.207 High High
cufflinks 50.8585 0.0 131.547 High  
cufflinks 63.2562 0.0 164.544 High  
cufflinks 25.0579 0.0 65.6607   Low
cufflinks 19.1586 0.0 51.0395   Low
cufflinks 31.024 0.0 80.5962 High  
cufflinks 49.9553 0.0 129.18 High  
cufflinks 57.2462 0.0 148.333 High  

0 Strain