Gene : Phvul.007G020300 P. vulgaris v2.1
Defline:  (1 of 3) K14007 - protein transport protein SEC24 (SEC24) Genomic Order:  200
Name:  ? Phvul.007G020300 Secondary Identifier:  ? PAC:37164739
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G020300 0.5kb upstream 0.5kb upstream 18646 true Chr07: 1403276-1421921 Phaseolus vulgaris
Phvul.007G020300 0.5kb upstream 0.5kb upstream 500 false Chr07: 1421422-1421921 Phaseolus vulgaris
Phvul.007G020300 0.5kb downstream 0.5kb downstream 18646 true Chr07: 1402776-1421421 Phaseolus vulgaris
Phvul.007G020300 0.5kb downstream 0.5kb downstream 500 false Chr07: 1402776-1403275 Phaseolus vulgaris
Phvul.007G020300 1.0kb upstream 1.0kb upstream 19146 true Chr07: 1403276-1422421 Phaseolus vulgaris
Phvul.007G020300 1.0kb upstream 1.0kb upstream 1000 false Chr07: 1421422-1422421 Phaseolus vulgaris
Phvul.007G020300 1.0kb downstream 1.0kb downstream 19146 true Chr07: 1402276-1421421 Phaseolus vulgaris
Phvul.007G020300 1.0kb downstream 1.0kb downstream 1000 false Chr07: 1402276-1403275 Phaseolus vulgaris
Phvul.007G020300 2.0kb upstream 2.0kb upstream 20146 true Chr07: 1403276-1423421 Phaseolus vulgaris
Phvul.007G020300 2.0kb upstream 2.0kb upstream 2000 false Chr07: 1421422-1423421 Phaseolus vulgaris
Phvul.007G020300 2.0kb downstream 2.0kb downstream 20146 true Chr07: 1401276-1421421 Phaseolus vulgaris
Phvul.007G020300 2.0kb downstream 2.0kb downstream 2000 false Chr07: 1401276-1403275 Phaseolus vulgaris
Phvul.007G020300 5.0kb upstream 5.0kb upstream 23146 true Chr07: 1403276-1426421 Phaseolus vulgaris
Phvul.007G020300 5.0kb upstream 5.0kb upstream 5000 false Chr07: 1421422-1426421 Phaseolus vulgaris
Phvul.007G020300 5.0kb downstream 5.0kb downstream 23146 true Chr07: 1398276-1421421 Phaseolus vulgaris
Phvul.007G020300 5.0kb downstream 5.0kb downstream 5000 false Chr07: 1398276-1403275 Phaseolus vulgaris
Phvul.007G020300 10.0kb upstream 10.0kb upstream 28146 true Chr07: 1403276-1431421 Phaseolus vulgaris
Phvul.007G020300 10.0kb upstream 10.0kb upstream 10000 false Chr07: 1421422-1431421 Phaseolus vulgaris
Phvul.007G020300 10.0kb downstream 10.0kb downstream 28146 true Chr07: 1393276-1421421 Phaseolus vulgaris
Phvul.007G020300 10.0kb downstream 10.0kb downstream 10000 false Chr07: 1393276-1403275 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304770 5265 Fabidae View MSA
124069114 5270 Rosid View MSA
123737025 5271 Pentapetalae View MSA
122786743 5272 Eudicot View MSA
122044519 5273 Angiosperm View MSA
121345636 5274 Embryophyte View MSA
123424318 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.9999 0.0 46.9115   Low
cufflinks 35.9278 0.0 98.2587 High  
cufflinks 33.738 0.0 91.9175    
cufflinks 40.607 0.0 112.394 High  
cufflinks 42.4661 0.0 118.212 High  
cufflinks 36.38 0.0 99.6969 High  
cufflinks 43.7086 0.0 122.199 High  
cufflinks 46.7334 0.0 131.76 High  
cufflinks 54.2109 0.0 154.943 High High
cufflinks 50.7484 0.0 144.065 High  
cufflinks 44.5438 0.0 124.251 High  

0 Strain